Results 81 - 83 of 83 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
26515 | 5' | -60.8 | NC_005357.1 | + | 23369 | 0.78 | 0.058207 |
Target: 5'- cGGCGAGGACACGCUGaucGACGcCgCCGGCg -3' miRNA: 3'- -CCGUUCCUGUGCGGC---CUGCcG-GGCUG- -5' |
|||||||
26515 | 5' | -60.8 | NC_005357.1 | + | 15691 | 0.79 | 0.042564 |
Target: 5'- cGCAGcGGGCGCGCUGGcggUGGCCCGGCu -3' miRNA: 3'- cCGUU-CCUGUGCGGCCu--GCCGGGCUG- -5' |
|||||||
26515 | 5' | -60.8 | NC_005357.1 | + | 17840 | 1.1 | 0.000191 |
Target: 5'- cGGCAAGGACACGCCGGACGGCCCGACc -3' miRNA: 3'- -CCGUUCCUGUGCGGCCUGCCGGGCUG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home