Results 101 - 103 of 103 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
26672 | 5' | -59.5 | NC_005808.1 | + | 40839 | 0.67 | 0.347914 |
Target: 5'- aCGCGCca--GGCGC---AGGCCGGCc -3' miRNA: 3'- cGCGCGucagCCGUGaacUCCGGCCG- -5' |
|||||||
26672 | 5' | -59.5 | NC_005808.1 | + | 41278 | 0.66 | 0.418293 |
Target: 5'- uCGCGCuuGUCGGC-CUgGuGGCCGucGCc -3' miRNA: 3'- cGCGCGu-CAGCCGuGAaCuCCGGC--CG- -5' |
|||||||
26672 | 5' | -59.5 | NC_005808.1 | + | 42501 | 0.66 | 0.433375 |
Target: 5'- gGCGCGCAGaacgaucuggaaaUGGCucGCUUcGAGGCaacccuaGGCg -3' miRNA: 3'- -CGCGCGUCa------------GCCG--UGAA-CUCCGg------CCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home