Results 61 - 69 of 69 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 18864 | 0.66 | 0.286062 |
|
Target: 5'- uGGCGCU--GCUGCGCG-CCaCCgagGCa -3' miRNA: 3'- gCCGCGGacCGACGCGUaGGcGGa--CG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 14323 | 0.66 | 0.286062 |
|
Target: 5'- gCGcGCGCCuUGGCUGaacugCCggGCCUGCu -3' miRNA: 3'- -GC-CGCGG-ACCGACgcguaGG--CGGACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 3184 | 0.66 | 0.286062 |
|
Target: 5'- cCGGCGUCc-GCUGCGUAca-GCUUGCu -3' miRNA: 3'- -GCCGCGGacCGACGCGUaggCGGACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 18064 | 0.66 | 0.286062 |
|
Target: 5'- cCGGCGCg-GGgUGCGUgcugggCCGCCgaagccgGCg -3' miRNA: 3'- -GCCGCGgaCCgACGCGua----GGCGGa------CG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 30473 | 0.66 | 0.286062 |
|
Target: 5'- gGGCGCC-GGUcauCGCGUCa-CCUGCu -3' miRNA: 3'- gCCGCGGaCCGac-GCGUAGgcGGACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 24363 | 0.66 | 0.286062 |
|
Target: 5'- uCGG-GUCgagGGCUucGCGCAUUCGCCaccacaacucgcUGCg -3' miRNA: 3'- -GCCgCGGa--CCGA--CGCGUAGGCGG------------ACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 31177 | 0.66 | 0.286062 |
|
Target: 5'- cCGGUGaagcaCgGGCcGCGCAcguUCUGCCUGa -3' miRNA: 3'- -GCCGCg----GaCCGaCGCGU---AGGCGGACg -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 22011 | 0.66 | 0.288175 |
|
Target: 5'- uCGGCGCCUGGCucgaaauagaccgacUuccacgccauguuGCGguCGUCgCGCUUGCu -3' miRNA: 3'- -GCCGCGGACCG---------------A-------------CGC--GUAG-GCGGACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 10110 | 0.66 | 0.293153 |
|
Target: 5'- uCGGC-CUUGGauucggGCGCAUCgGCC-GCc -3' miRNA: 3'- -GCCGcGGACCga----CGCGUAGgCGGaCG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home