Results 61 - 69 of 69 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 41913 | 0.72 | 0.102321 |
|
Target: 5'- gGGCGCCcGGCcgGCGCcgCCGUagGCg -3' miRNA: 3'- gCCGCGGaCCGa-CGCGuaGGCGgaCG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 10059 | 0.71 | 0.113929 |
|
Target: 5'- cCGGCGgcagcauCCUGGCcG-GCAUCaccaGCCUGCa -3' miRNA: 3'- -GCCGC-------GGACCGaCgCGUAGg---CGGACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 15141 | 0.71 | 0.12745 |
|
Target: 5'- gCGGCGCgCUGGCauaccaGCGCcaggGCCUGCg -3' miRNA: 3'- -GCCGCG-GACCGa-----CGCGuaggCGGACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 16144 | 0.71 | 0.12745 |
|
Target: 5'- aCGGaUGCCgaGGUcgaGCGCAUCCGCgaaCUGCa -3' miRNA: 3'- -GCC-GCGGa-CCGa--CGCGUAGGCG---GACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 33566 | 0.7 | 0.138268 |
|
Target: 5'- uCGGCuuuacGUCUGGUgacgaacugGUGCG-CCGCCUGCu -3' miRNA: 3'- -GCCG-----CGGACCGa--------CGCGUaGGCGGACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 28763 | 0.7 | 0.142058 |
|
Target: 5'- aGGCGCaauuGCUGgGCAaaUCCGCCgagugGCa -3' miRNA: 3'- gCCGCGgac-CGACgCGU--AGGCGGa----CG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 17513 | 0.69 | 0.158184 |
|
Target: 5'- aCGGCGCCgGGC-GCGC-UgCGCUgggugGCg -3' miRNA: 3'- -GCCGCGGaCCGaCGCGuAgGCGGa----CG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 38746 | 0.69 | 0.171801 |
|
Target: 5'- aCGGCGCCUGGUacaacuucgccgagGUcaugacucaccacgGCAagCGCCUGCc -3' miRNA: 3'- -GCCGCGGACCGa-------------CG--------------CGUagGCGGACG- -5' |
|||||||
| 26801 | 5' | -62.8 | NC_005808.1 | + | 42423 | 0.82 | 0.017016 |
|
Target: 5'- aCGGUGCCcaGCgacaccgggGCGCAUCCGCCUGCg -3' miRNA: 3'- -GCCGCGGacCGa--------CGCGUAGGCGGACG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home