miRNA display CGI

Results 61 - 67 of 67 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
27028	5'	-56.5	NC_005832.1	+	95814	0.68	0.74361
	Target:  5'- -gGAgGGCAcguguucaGGGCCCUCGagagggaguGCGCCGa- -3' miRNA:   3'- ggCUgCCGU--------UCUGGGAGU---------UGCGGCag -5'
27028	5'	-56.5	NC_005832.1	+	95842	0.78	0.240146
	Target:  5'- gCCGcaGCGGgaAAGACUCUCGccGCGCCGUCa -3' miRNA:   3'- -GGC--UGCCg-UUCUGGGAGU--UGCGGCAG- -5'
27028	5'	-56.5	NC_005832.1	+	96747	0.74	0.407786
	Target:  5'- -aGACGGC-AGACUCUC-ACGgCGUCa -3' miRNA:   3'- ggCUGCCGuUCUGGGAGuUGCgGCAG- -5'
27028	5'	-56.5	NC_005832.1	+	97069	0.69	0.65254
	Target:  5'- cUCGGaGGCAAGGCCCagGAgGCCcuGUCg -3' miRNA:   3'- -GGCUgCCGUUCUGGGagUUgCGG--CAG- -5'
27028	5'	-56.5	NC_005832.1	+	98717	0.66	0.826642
	Target:  5'- -aGGCaGGCAcaGGGCCgUgAACGCCGg- -3' miRNA:   3'- ggCUG-CCGU--UCUGGgAgUUGCGGCag -5'
27028	5'	-56.5	NC_005832.1	+	104103	0.69	0.683368
	Target:  5'- uCCG-CGGC--GGCCCUCAGgGCCa-- -3' miRNA:   3'- -GGCuGCCGuuCUGGGAGUUgCGGcag -5'
27028	5'	-56.5	NC_005832.1	+	104231	0.67	0.772517
	Target:  5'- aCG-CGGCc--ACCCUgccccaguuuaCAACGCCGUCu -3' miRNA:   3'- gGCuGCCGuucUGGGA-----------GUUGCGGCAG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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