Results 41 - 43 of 43 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
27217 | 3' | -58.8 | NC_005832.1 | + | 67012 | 0.79 | 0.161786 |
Target: 5'- aCgUCCCG-CUGCGAGGGCCCUGgcggcggCCg -3' miRNA: 3'- aGgAGGGCaGAUGCUCCUGGGGCa------GG- -5' |
|||||||
27217 | 3' | -58.8 | NC_005832.1 | + | 58287 | 0.81 | 0.113207 |
Target: 5'- uUUCUCCCagagaCUAUGAGGACCUCGUCCu -3' miRNA: 3'- -AGGAGGGca---GAUGCUCCUGGGGCAGG- -5' |
|||||||
27217 | 3' | -58.8 | NC_005832.1 | + | 80675 | 1.11 | 0.001009 |
Target: 5'- gUCCUCCCGUCUACGAGGACCCCGUCCc -3' miRNA: 3'- -AGGAGGGCAGAUGCUCCUGGGGCAGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home