Results 21 - 22 of 22 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
2750 | 5' | -57.9 | NC_001491.2 | + | 116708 | 0.78 | 0.224008 |
Target: 5'- uGcCGCGGC-CGCGGccGCUCCGGGGACc -3' miRNA: 3'- gC-GUGUCGaGCGCCa-UGAGGCUCCUG- -5' |
|||||||
2750 | 5' | -57.9 | NC_001491.2 | + | 148696 | 0.79 | 0.203264 |
Target: 5'- uCGCucaGCAGCUCGgGGaucagaaGCUCCGAGGGCu -3' miRNA: 3'- -GCG---UGUCGAGCgCCa------UGAGGCUCCUG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home