miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28028	3'	-54.7	NC_005887.1	+	30341	0.7	0.395802
	Target:  5'- -cGCGCAgCCGGUuuucaaugccCCGaUGCCGAGCu -3' miRNA:   3'- gaCGCGUaGGCUA----------GGCaACGGUUCGu -5'
28028	3'	-54.7	NC_005887.1	+	35586	0.7	0.394863
	Target:  5'- gUGCGUgcgguaaccuuccAUCCGAccgCCGUUGCCGuccGCAu -3' miRNA:   3'- gACGCG-------------UAGGCUa--GGCAACGGUu--CGU- -5'
28028	3'	-54.7	NC_005887.1	+	24900	0.71	0.350632
	Target:  5'- uUGCGCGUCgGAUUCGg-GCCGuAGCGc -3' miRNA:   3'- gACGCGUAGgCUAGGCaaCGGU-UCGU- -5'
28028	3'	-54.7	NC_005887.1	+	26942	0.72	0.309248
	Target:  5'- aUGCGCGUCgaCGAUCCGcUGCCcgcGCGc -3' miRNA:   3'- gACGCGUAG--GCUAGGCaACGGuu-CGU- -5'
28028	3'	-54.7	NC_005887.1	+	26845	0.74	0.237893
	Target:  5'- -gGCGCGUCUGccgguagCCGUUGCCGccgGGCAc -3' miRNA:   3'- gaCGCGUAGGCua-----GGCAACGGU---UCGU- -5'
28028	3'	-54.7	NC_005887.1	+	23730	0.75	0.202054
	Target:  5'- -cGgGCcgCCGAUCgCGcUGCCGAGCAa -3' miRNA:   3'- gaCgCGuaGGCUAG-GCaACGGUUCGU- -5'
28028	3'	-54.7	NC_005887.1	+	25320	1.08	0.000817
	Target:  5'- gCUGCGCAUCCGAUCCGUUGCCAAGCAc -3' miRNA:   3'- -GACGCGUAGGCUAGGCAACGGUUCGU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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