miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28075	5'	-58.6	NC_005887.1	+	26669	0.66	0.451922
	Target:  5'- -cCG-GCCGCgCGGCGGuGAgcuggucgAGCUCGg -3' miRNA:   3'- uaGCaCGGCGaGCUGCC-CU--------UCGAGCa -5'
28075	5'	-58.6	NC_005887.1	+	41867	0.66	0.42283
	Target:  5'- cUCGUGCCGUUCGAgcGGAAuuUCGa -3' miRNA:   3'- uAGCACGGCGAGCUgcCCUUcgAGCa -5'
28075	5'	-58.6	NC_005887.1	+	11785	0.67	0.394892
	Target:  5'- -gCGUccucGCUGCUCGGCGGcGucGGUUCGUa -3' miRNA:   3'- uaGCA----CGGCGAGCUGCC-Cu-UCGAGCA- -5'
28075	5'	-58.6	NC_005887.1	+	40369	0.69	0.303187
	Target:  5'- -cCGUGCCGCUCGucGCGcGcGAGGaaaUCGUg -3' miRNA:   3'- uaGCACGGCGAGC--UGC-C-CUUCg--AGCA- -5'
28075	5'	-58.6	NC_005887.1	+	34850	0.69	0.303187
	Target:  5'- gGUCGUGCCGC-CGA-GGGuguAGUUCa- -3' miRNA:   3'- -UAGCACGGCGaGCUgCCCu--UCGAGca -5'
28075	5'	-58.6	NC_005887.1	+	40288	0.69	0.281198
	Target:  5'- aGUCgGUGCCGCUCGAuuCGuucGAGCUCGa -3' miRNA:   3'- -UAG-CACGGCGAGCU--GCcc-UUCGAGCa -5'
28075	5'	-58.6	NC_005887.1	+	16394	0.69	0.281198
	Target:  5'- aGUCGagacgGCCGC-CGGCcGGAAGCUCa- -3' miRNA:   3'- -UAGCa----CGGCGaGCUGcCCUUCGAGca -5'
28075	5'	-58.6	NC_005887.1	+	9730	1.05	0.000574
	Target:  5'- cAUCGUGCCGCUCGACGGGAAGCUCGUg -3' miRNA:   3'- -UAGCACGGCGAGCUGCCCUUCGAGCA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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