miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28106	5'	-53.7	NC_005887.1	+	39478	0.7	0.476252
	Target:  5'- aAAGCgCGUGUUgccgcUGGCCAGgcUGACGAACu -3' miRNA:   3'- -UUCG-GUACGA-----GCCGGUU--ACUGCUUGc -5'
28106	5'	-53.7	NC_005887.1	+	42048	0.7	0.445049
	Target:  5'- cAGGCCGUGCU--GCUGAUaGGCGAGCGc -3' miRNA:   3'- -UUCGGUACGAgcCGGUUA-CUGCUUGC- -5'
28106	5'	-53.7	NC_005887.1	+	40413	0.71	0.405295
	Target:  5'- cGGCCGcGCUcgaCGGCCAGUccauuucggcGGCGAACGu -3' miRNA:   3'- uUCGGUaCGA---GCCGGUUA----------CUGCUUGC- -5'
28106	5'	-53.7	NC_005887.1	+	5572	0.71	0.395711
	Target:  5'- cGGCCgGUGCUgCGGCCGGUGcuGCGGcCGg -3' miRNA:   3'- uUCGG-UACGA-GCCGGUUAC--UGCUuGC- -5'
28106	5'	-53.7	NC_005887.1	+	3897	0.72	0.332856
	Target:  5'- -cGCCAUGC-CGgauguGCgGAUGGCGAACGa -3' miRNA:   3'- uuCGGUACGaGC-----CGgUUACUGCUUGC- -5'
28106	5'	-53.7	NC_005887.1	+	23503	0.76	0.189416
	Target:  5'- -uGCCGacgUGUUCGGCCGcgcUGACGAACGc -3' miRNA:   3'- uuCGGU---ACGAGCCGGUu--ACUGCUUGC- -5'
28106	5'	-53.7	NC_005887.1	+	3035	1.07	0.001173
	Target:  5'- aAAGCCAUGCUCGGCCAAUGACGAACGa -3' miRNA:   3'- -UUCGGUACGAGCCGGUUACUGCUUGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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