miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28113	5'	-58.3	NC_005887.1	+	35939	0.66	0.431249
	Target:  5'- -gGGCGCgGCGUCGcGGUGUcuGCcgAGCGc -3' miRNA:   3'- uaCCGUG-CGCAGCuCCACA--CG--UCGUu -5'
28113	5'	-58.3	NC_005887.1	+	23124	0.67	0.374633
	Target:  5'- uUGGCugGCGgUGAGGUGa-CGGCGu -3' miRNA:   3'- uACCGugCGCaGCUCCACacGUCGUu -5'
28113	5'	-58.3	NC_005887.1	+	27530	0.67	0.365698
	Target:  5'- -cGGCGgGCGgucaugggCGGcgcuccaucauGGUGUGCAGCAc -3' miRNA:   3'- uaCCGUgCGCa-------GCU-----------CCACACGUCGUu -5'
28113	5'	-58.3	NC_005887.1	+	38163	0.68	0.323267
	Target:  5'- -aGGCcgaGCGCGaaauaGGcGGUGUGCAGCAu -3' miRNA:   3'- uaCCG---UGCGCag---CU-CCACACGUCGUu -5'
28113	5'	-58.3	NC_005887.1	+	15377	0.69	0.256397
	Target:  5'- -aGGUaauuguucACGCgGUCGAGGUaUGCGGCAGu -3' miRNA:   3'- uaCCG--------UGCG-CAGCUCCAcACGUCGUU- -5'
28113	5'	-58.3	NC_005887.1	+	13188	0.7	0.224393
	Target:  5'- -cGGCACGC-UCGAGGUGUcgaccuuCGGCAc -3' miRNA:   3'- uaCCGUGCGcAGCUCCACAc------GUCGUu -5'
28113	5'	-58.3	NC_005887.1	+	5530	0.74	0.124886
	Target:  5'- -cGGCcUGCGUCGuGGUGgaUGCGGCAGg -3' miRNA:   3'- uaCCGuGCGCAGCuCCAC--ACGUCGUU- -5'
28113	5'	-58.3	NC_005887.1	+	5177	1.04	0.000566
	Target:  5'- gAUGGCACGCGUCGAGGUGUGCAGCAAg -3' miRNA:   3'- -UACCGUGCGCAGCUCCACACGUCGUU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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