Results 21 - 40 of 58 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 107462 | 0.68 | 0.99997 |
Target: 5'- -cGUUGAUGAUGUCUUaaGAGUUAAGa -3' miRNA: 3'- aaUAACUAUUGCGGAAccCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 31381 | 0.68 | 0.999945 |
Target: 5'- aUUGUUGAUAAUGCCUUaaaAGUUAAAg -3' miRNA: 3'- -AAUAACUAUUGCGGAAcccUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 85809 | 0.69 | 0.999926 |
Target: 5'- -cAUUGuaAUAAUGCUUUGGG-GUUAAAg -3' miRNA: 3'- aaUAAC--UAUUGCGGAACCCuCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 142076 | 0.69 | 0.999901 |
Target: 5'- gUUAUUGAUGAUGCCUUcGaAGUUAAc -3' miRNA: 3'- -AAUAACUAUUGCGGAAcCcUCAAUUu -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 154692 | 0.69 | 0.999901 |
Target: 5'- gUUAUUGAUGAUGUUU--GGAGUUAAAg -3' miRNA: 3'- -AAUAACUAUUGCGGAacCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 174701 | 0.69 | 0.999869 |
Target: 5'- gUUAUUGAUGAUGUCUUaaGAGUUAAu -3' miRNA: 3'- -AAUAACUAUUGCGGAAccCUCAAUUu -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 167524 | 0.69 | 0.999869 |
Target: 5'- -cAUUaAUAAUGCCUUaGGAGUUAAAg -3' miRNA: 3'- aaUAAcUAUUGCGGAAcCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 172697 | 0.69 | 0.999829 |
Target: 5'- gUGUUGucaAUGAUGCCUUaGGGGUUAAc -3' miRNA: 3'- aAUAAC---UAUUGCGGAAcCCUCAAUUu -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 106109 | 0.69 | 0.999829 |
Target: 5'- -cAUUaAUGAUGCCUUaGGAGUUAAAg -3' miRNA: 3'- aaUAAcUAUUGCGGAAcCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 104301 | 0.69 | 0.999829 |
Target: 5'- -cAUUGAUGACGgUgugaggugGGGGGUUAAAg -3' miRNA: 3'- aaUAACUAUUGCgGaa------CCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 131044 | 0.7 | 0.99941 |
Target: 5'- gUUAUUaAUGAUGCCUUaGGGGUUAAAg -3' miRNA: 3'- -AAUAAcUAUUGCGGAAcCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 118843 | 0.71 | 0.99908 |
Target: 5'- -cAUUGuuauUGAUGCCUUaGGAGUUAAAg -3' miRNA: 3'- aaUAACu---AUUGCGGAAcCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 48207 | 0.71 | 0.99908 |
Target: 5'- ----cGAUGACGCCUUaGGAGcUAAAg -3' miRNA: 3'- aauaaCUAUUGCGGAAcCCUCaAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 104186 | 0.71 | 0.998863 |
Target: 5'- -----aAUAACGCCUUaGGAGUUAAAg -3' miRNA: 3'- aauaacUAUUGCGGAAcCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 110287 | 0.72 | 0.997934 |
Target: 5'- -cAUUGAUggUGCUUUaGGAGUUAAGa -3' miRNA: 3'- aaUAACUAuuGCGGAAcCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 180993 | 0.72 | 0.997934 |
Target: 5'- -cAUUGAcAACGCUUUaGGAGUUAAAg -3' miRNA: 3'- aaUAACUaUUGCGGAAcCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 139851 | 0.72 | 0.997509 |
Target: 5'- -cAUUGAUGACGCCaUGaguuaGGGGUUAAc -3' miRNA: 3'- aaUAACUAUUGCGGaAC-----CCUCAAUUu -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 51763 | 0.72 | 0.996437 |
Target: 5'- aUUGUUaAUAAUGCCUUaGGAGUUAAAg -3' miRNA: 3'- -AAUAAcUAUUGCGGAAcCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 110012 | 0.73 | 0.994145 |
Target: 5'- aUUAUUGAUAAUaCCUUaGGAGUUAAAg -3' miRNA: 3'- -AAUAACUAUUGcGGAAcCCUCAAUUU- -5' |
|||||||
28257 | 5' | -44.3 | NC_005902.1 | + | 122868 | 0.73 | 0.994145 |
Target: 5'- aUUGUUGAUGAUGCCUUaGGAaUUAAAg -3' miRNA: 3'- -AAUAACUAUUGCGGAAcCCUcAAUUU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home