Results 61 - 72 of 72 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 58191 | 0.67 | 0.999988 |
Target: 5'- cAUCAUCAAUGAUGcGUa--GAGUUAAa -3' miRNA: 3'- -UAGUAGUUACUGCaCAaucCUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 169090 | 0.67 | 0.999983 |
Target: 5'- cGUCGUUGAUGACaGUGU--GGAGUa-- -3' miRNA: 3'- -UAGUAGUUACUG-CACAauCCUCAauu -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 127436 | 0.67 | 0.999988 |
Target: 5'- cAUCAUCAAUGAUGcGUa--GAGUUAAa -3' miRNA: 3'- -UAGUAGUUACUGCaCAaucCUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 127693 | 0.67 | 0.99999 |
Target: 5'- cGUCAUCAAUacuuUGUGUuauugauaacgccuUGGGAGUUAAa -3' miRNA: 3'- -UAGUAGUUAcu--GCACA--------------AUCCUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 11107 | 0.67 | 0.999988 |
Target: 5'- -aUAUCAAUGAUauuUUAGGAGUUAAu -3' miRNA: 3'- uaGUAGUUACUGcacAAUCCUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 118749 | 0.66 | 0.999997 |
Target: 5'- uAUUAUCAAUaAUGU-UUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGUUAcUGCAcAAUCCUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 74864 | 0.66 | 0.999996 |
Target: 5'- cGUCAUCAAcaACGcaUUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGUUacUGCacAAUCCUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 160966 | 0.66 | 0.999999 |
Target: 5'- uAUCGUCAAcaACGcuUUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGUUacUGCacAAUCCUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 82100 | 0.66 | 0.999996 |
Target: 5'- uAUCAUCAAUGAUGcuUUaagaauuaaAGGGGUUAAa -3' miRNA: 3'- -UAGUAGUUACUGCacAA---------UCCUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 152777 | 0.66 | 0.999997 |
Target: 5'- uGUCAUCGAcGAUacuUUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGUUaCUGcacAAUCCUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 55224 | 0.66 | 0.999997 |
Target: 5'- uGUUAUCGAUGACGccUUAGaAGUUAAa -3' miRNA: 3'- -UAGUAGUUACUGCacAAUCcUCAAUU- -5' |
|||||||
28259 | 5' | -44.7 | NC_005902.1 | + | 33172 | 0.66 | 0.999997 |
Target: 5'- uGUCAUCGAcGAUacuUUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGUUaCUGcacAAUCCUCAAUU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home