Results 21 - 40 of 41 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 135650 | 0.73 | 0.999339 |
Target: 5'- cCCuUUAAAUCCuAAGGCUUAUAUgagUGa -3' miRNA: 3'- -GGuAAUUUAGG-UUCCGAGUAUGa--ACa -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 100385 | 0.73 | 0.999339 |
Target: 5'- -gGUUAAAUCCuAAGGCUUAUAUgagUGa -3' miRNA: 3'- ggUAAUUUAGG-UUCCGAGUAUGa--ACa -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 143484 | 0.73 | 0.999339 |
Target: 5'- cCCuUUAAAUCCuAAGGCUUAUAUgagUGa -3' miRNA: 3'- -GGuAAUUUAGG-UUCCGAGUAUGa--ACa -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 49590 | 0.75 | 0.997319 |
Target: 5'- -gAUUAAAcaCUAAGGCUUAUACUUGUu -3' miRNA: 3'- ggUAAUUUa-GGUUCCGAGUAUGAACA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 95457 | 0.76 | 0.995514 |
Target: 5'- cCCuUUAAAUCCuAAGGCUUAUACaaGUa -3' miRNA: 3'- -GGuAAUUUAGG-UUCCGAGUAUGaaCA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 143769 | 0.76 | 0.995514 |
Target: 5'- -gGUUAAGUCCuAAGGCUUAUACaaGUg -3' miRNA: 3'- ggUAAUUUAGG-UUCCGAGUAUGaaCA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 175692 | 0.76 | 0.995514 |
Target: 5'- aCCuuUUAAAUCCuAAGGCUUAUACgaGUa -3' miRNA: 3'- -GGu-AAUUUAGG-UUCCGAGUAUGaaCA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 22554 | 0.76 | 0.995514 |
Target: 5'- uCCuUUAAAUCCuAAGGCU-AUACUUGUu -3' miRNA: 3'- -GGuAAUUUAGG-UUCCGAgUAUGAACA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 90700 | 0.76 | 0.993834 |
Target: 5'- aCCAuUUAAAUCCuAAGGCUUAUACa--- -3' miRNA: 3'- -GGU-AAUUUAGG-UUCCGAGUAUGaaca -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 152914 | 0.78 | 0.983682 |
Target: 5'- aCCuuUUAAAUCCuAAGGCUUAUACUUa- -3' miRNA: 3'- -GGu-AAUUUAGG-UUCCGAGUAUGAAca -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 36242 | 0.78 | 0.981548 |
Target: 5'- --uUUAAAUCuUAAGGCUUAUACUUGUu -3' miRNA: 3'- gguAAUUUAG-GUUCCGAGUAUGAACA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 8631 | 0.78 | 0.979212 |
Target: 5'- cCCuUUAAAUCUuauGGCUUAUACUUGUu -3' miRNA: 3'- -GGuAAUUUAGGuu-CCGAGUAUGAACA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 100277 | 0.79 | 0.970887 |
Target: 5'- uCCuUUAAAUCCuAAGGCUUAUACUUa- -3' miRNA: 3'- -GGuAAUUUAGG-UUCCGAGUAUGAAca -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 120373 | 0.79 | 0.964152 |
Target: 5'- cCCuUUAAAUCCuAAGGCUUAUACUUa- -3' miRNA: 3'- -GGuAAUUUAGG-UUCCGAGUAUGAAca -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 173340 | 0.81 | 0.932252 |
Target: 5'- cCCGUUAAAUCuUAAGGCUUAUACUg-- -3' miRNA: 3'- -GGUAAUUUAG-GUUCCGAGUAUGAaca -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 27865 | 0.82 | 0.907863 |
Target: 5'- cCCuUUAAAUCuUAAGGCUUAUACUUGUu -3' miRNA: 3'- -GGuAAUUUAG-GUUCCGAGUAUGAACA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 161843 | 0.84 | 0.828093 |
Target: 5'- cUCAUUAAAUCuUAAGGCUCAUACaUGUg -3' miRNA: 3'- -GGUAAUUUAG-GUUCCGAGUAUGaACA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 107373 | 0.87 | 0.727537 |
Target: 5'- cCCuUUAAAUCCuAGGGCUUAUACUUGUu -3' miRNA: 3'- -GGuAAUUUAGG-UUCCGAGUAUGAACA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 139743 | 0.87 | 0.716748 |
Target: 5'- uCCuUUAAAUCCuAAGGCUUAUACUUGUu -3' miRNA: 3'- -GGuAAUUUAGG-UUCCGAGUAUGAACA- -5' |
|||||||
28268 | 3' | -42.9 | NC_005902.1 | + | 184517 | 0.87 | 0.716748 |
Target: 5'- uCCuUUAAAUCCuAAGGCUUAUACUUGUu -3' miRNA: 3'- -GGuAAUUUAGG-UUCCGAGUAUGAACA- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home