Results 101 - 120 of 204 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 105081 | 0.7 | 0.996748 |
Target: 5'- aACCCUUUAAUACCUAccuaAGCUAUaUAUGa -3' miRNA: 3'- -UGGGAGAUUGUGGAU----UUGGUAcAUAU- -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 83987 | 0.7 | 0.9964 |
Target: 5'- aACCCUUUAACACUUAAgugauauacucacucACCAcauuuguuUGUAUAu -3' miRNA: 3'- -UGGGAGAUUGUGGAUU---------------UGGU--------ACAUAU- -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 90568 | 0.7 | 0.996151 |
Target: 5'- gGCCCccaacguauUUUGAaACCUAAACCGUGUAa- -3' miRNA: 3'- -UGGG---------AGAUUgUGGAUUUGGUACAUau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 67244 | 0.7 | 0.996151 |
Target: 5'- uACCCUUUAACuCCUAAGCUAUa---- -3' miRNA: 3'- -UGGGAGAUUGuGGAUUUGGUAcauau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 167503 | 0.71 | 0.994688 |
Target: 5'- uACCCUUUAACACCUAAGuuAUa---- -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUggUAcauau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 110350 | 0.71 | 0.994688 |
Target: 5'- uAUCCUUUAAUACCUAAGCUAUa---- -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUAcauau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 26745 | 0.7 | 0.995468 |
Target: 5'- aACCCUUUAACAUUUAAGCUAU-UAUAu -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUAcAUAU- -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 136300 | 0.7 | 0.996151 |
Target: 5'- uACCCUUUAACuCCUAAGCUAUa---- -3' miRNA: 3'- -UGGGAGAUUGuGGAUUUGGUAcauau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 123016 | 0.7 | 0.996151 |
Target: 5'- uACCCUUUAACcCCUAAGCUAUa---- -3' miRNA: 3'- -UGGGAGAUUGuGGAUUUGGUAcauau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 99555 | 0.81 | 0.734626 |
Target: 5'- aACCCUUUAACACCUAAGCUAUa---- -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUAcauau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 91856 | 0.81 | 0.734626 |
Target: 5'- aACCCUUUAACACCUAAGCUAUa---- -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUAcauau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 23255 | 0.81 | 0.734626 |
Target: 5'- aACCCUUUAACACCUAAGCUAUaUAUu -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUAcAUAu -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 13181 | 0.81 | 0.734626 |
Target: 5'- aACCCUUUAACACCUAAGCUAUa---- -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUAcauau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 48378 | 0.83 | 0.637251 |
Target: 5'- aACCCUUUAACACCUAAGuuAUGUAc- -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUggUACAUau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 47234 | 0.83 | 0.601045 |
Target: 5'- aACCCUUUAACACCUAAGCUAuauacacacuccuuUGUAUAu -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGU--------------ACAUAU- -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 112069 | 0.84 | 0.582485 |
Target: 5'- uACCCUUUAACACCUAAAUCAUaUAUAa -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUAcAUAU- -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 97174 | 0.84 | 0.571621 |
Target: 5'- aACCCUUUAACACCUAAGCUAUaUAUGa -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUAcAUAU- -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 50209 | 0.84 | 0.539352 |
Target: 5'- aACCCUUUAACACCUAAGCUAUaUAUAg -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUAcAUAU- -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 50042 | 0.88 | 0.37288 |
Target: 5'- uACCCUUUAACACCUAAGCUAUGUu-- -3' miRNA: 3'- -UGGGAGAUUGUGGAUUUGGUACAuau -5' |
|||||||
28276 | 3' | -46.5 | NC_005902.1 | + | 114355 | 0.66 | 0.99997 |
Target: 5'- --aUUCUAACACCUAAGCUAUa---- -3' miRNA: 3'- uggGAGAUUGUGGAUUUGGUAcauau -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home