Results 41 - 60 of 88 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 144125 | 0.73 | 0.796074 |
Target: 5'- uAUCAU---UGAUGCCUUAGGAGUUAAc -3' miRNA: 3'- -UAGUAgcuACUGCGGAAUCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 90507 | 0.73 | 0.823599 |
Target: 5'- cAUCAUCGAUGACGaugu-GGAGUUAAa -3' miRNA: 3'- -UAGUAGCUACUGCggaauCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 10671 | 0.73 | 0.805424 |
Target: 5'- -gUAUCGAUGAUGCau--GGAGCUAAa -3' miRNA: 3'- uaGUAGCUACUGCGgaauCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 165994 | 0.73 | 0.814602 |
Target: 5'- uAUCAUCaAUGAUGUUUUAGGAGUUAu -3' miRNA: 3'- -UAGUAGcUACUGCGGAAUCCUCGAUu -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 91284 | 0.73 | 0.814602 |
Target: 5'- cAUCAUCaAUaAUGCCUUAGGAGUUAAg -3' miRNA: 3'- -UAGUAGcUAcUGCGGAAUCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 104496 | 0.72 | 0.841013 |
Target: 5'- cGUCAUCaAUGAUGCCUUAaGAGUUAAc -3' miRNA: 3'- -UAGUAGcUACUGCGGAAUcCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 33474 | 0.72 | 0.86556 |
Target: 5'- uGUCAUCGAcGAUaCUUUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGCUaCUGcGGAAUCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 33172 | 0.72 | 0.86556 |
Target: 5'- uGUCAUCGAcGAUaCUUUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGCUaCUGcGGAAUCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 8559 | 0.7 | 0.931722 |
Target: 5'- uGUCAUCGAcaAUGUUUUAGGAGUUAAg -3' miRNA: 3'- -UAGUAGCUacUGCGGAAUCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 174700 | 0.7 | 0.914551 |
Target: 5'- cGUUAUUGAUGAUGUCUUAaGAGUUAAu -3' miRNA: 3'- -UAGUAGCUACUGCGGAAUcCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 61550 | 0.7 | 0.920536 |
Target: 5'- -gCAUCGuUGACaauGCCUUAGGAGUg-- -3' miRNA: 3'- uaGUAGCuACUG---CGGAAUCCUCGauu -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 118539 | 0.7 | 0.931722 |
Target: 5'- uAUCAUCGAUGAUGCCUUAaagauuaaaGAGUa-- -3' miRNA: 3'- -UAGUAGCUACUGCGGAAUc--------CUCGauu -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 66970 | 0.7 | 0.908307 |
Target: 5'- cAUCGUUGAUGAUGUgU--GGAGCUAAu -3' miRNA: 3'- -UAGUAGCUACUGCGgAauCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 68037 | 0.7 | 0.908307 |
Target: 5'- uGUCAUUGAcaAUGCUUUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGCUacUGCGGAAUCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 167521 | 0.69 | 0.936923 |
Target: 5'- cAUCAUUaAUaAUGCCUUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGcUAcUGCGGAAUCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 43805 | 0.69 | 0.950974 |
Target: 5'- uGUUAUCGAUGACaUUUUAGGAGUUu- -3' miRNA: 3'- -UAGUAGCUACUGcGGAAUCCUCGAuu -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 161990 | 0.69 | 0.955149 |
Target: 5'- uAUCAUCaAUGACaCCUUAGGuGUUAAa -3' miRNA: 3'- -UAGUAGcUACUGcGGAAUCCuCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 168526 | 0.69 | 0.950974 |
Target: 5'- -aCGUugCGAUGAUGCCUUAGGAaUUAAa -3' miRNA: 3'- uaGUA--GCUACUGCGGAAUCCUcGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 16032 | 0.69 | 0.940409 |
Target: 5'- uAUCAaUGAUGGggcaucauuaacaaUGCCUUAGGAGUUAAa -3' miRNA: 3'- -UAGUaGCUACU--------------GCGGAAUCCUCGAUU- -5' |
|||||||
28277 | 5' | -51.2 | NC_005902.1 | + | 162164 | 0.69 | 0.936923 |
Target: 5'- uGUUAUUaacGAUGCCUUAGGAGUUAAa -3' miRNA: 3'- -UAGUAGcuaCUGCGGAAUCCUCGAUU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home