Results 101 - 120 of 289 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 163512 | 0.76 | 0.999991 |
Target: 5'- -----aUUAACAUCUAAGCUAUAaACa -3' miRNA: 3'- guagaaAAUUGUAGGUUCGAUAUaUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 68280 | 0.76 | 0.999982 |
Target: 5'- uUAUCUUUUAAC-UCCuAAGCcAUAUACu -3' miRNA: 3'- -GUAGAAAAUUGuAGG-UUCGaUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 142155 | 0.76 | 0.999982 |
Target: 5'- -cUC-UUUAACAcCUAAGCUAUAUACu -3' miRNA: 3'- guAGaAAAUUGUaGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 42238 | 0.76 | 0.999982 |
Target: 5'- --cCUcUUAACAcCUAAGCUAUAUACa -3' miRNA: 3'- guaGAaAAUUGUaGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 113600 | 0.76 | 0.999991 |
Target: 5'- uUAUCcUUUAAUAUCUAAGC-AUAUACu -3' miRNA: 3'- -GUAGaAAAUUGUAGGUUCGaUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 157231 | 0.76 | 0.999982 |
Target: 5'- ----cUUUAACAcCUAAGCUAUAUACa -3' miRNA: 3'- guagaAAAUUGUaGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 165890 | 0.76 | 0.999982 |
Target: 5'- ----cUUUAACAcCUAAGCUAUAUACg -3' miRNA: 3'- guagaAAAUUGUaGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 6000 | 0.76 | 0.999987 |
Target: 5'- -cUCUUUUAACAaCCGAGCUGUu--- -3' miRNA: 3'- guAGAAAAUUGUaGGUUCGAUAuaug -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 104715 | 0.76 | 0.999991 |
Target: 5'- uUAUCcUUUAACuUUUAAGCUAUAUACu -3' miRNA: 3'- -GUAGaAAAUUGuAGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 91860 | 0.76 | 0.999982 |
Target: 5'- ----cUUUAACAcCUAAGCUAUAUACa -3' miRNA: 3'- guagaAAAUUGUaGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 127778 | 0.75 | 0.999994 |
Target: 5'- --cCUUUUAACAcUgAAGCUAUAUACu -3' miRNA: 3'- guaGAAAAUUGUaGgUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 124390 | 0.75 | 0.999996 |
Target: 5'- -cUC-UUUAACAUCUAAGCUAUAc-- -3' miRNA: 3'- guAGaAAAUUGUAGGUUCGAUAUaug -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 71324 | 0.75 | 0.999996 |
Target: 5'- -----gUUAACAUCUAAGUUAUAUAUa -3' miRNA: 3'- guagaaAAUUGUAGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 1403 | 0.75 | 0.999996 |
Target: 5'- gCGUCaccuUUUUAACccCUAAGCUAUAUACg -3' miRNA: 3'- -GUAG----AAAAUUGuaGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 143776 | 0.75 | 0.999997 |
Target: 5'- ----cUUUAACAcCUAAGCUAUAUACu -3' miRNA: 3'- guagaAAAUUGUaGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 179813 | 0.75 | 0.999997 |
Target: 5'- ----cUUUAACAaCUAAGCUAUAUACu -3' miRNA: 3'- guagaAAAUUGUaGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 29203 | 0.75 | 0.999998 |
Target: 5'- aAUCUUUUAACucuuuaacacCUAAGCUAUAUAUg -3' miRNA: 3'- gUAGAAAAUUGua--------GGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 40672 | 0.75 | 0.999994 |
Target: 5'- ----cUUUAACGUUUAAGCUAUAUAUa -3' miRNA: 3'- guagaAAAUUGUAGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 137774 | 0.75 | 0.999994 |
Target: 5'- --cUUUUUAACAcCUAAGCUAUAUAUa -3' miRNA: 3'- guaGAAAAUUGUaGGUUCGAUAUAUG- -5' |
|||||||
28292 | 3' | -38.8 | NC_005902.1 | + | 162605 | 0.75 | 0.999997 |
Target: 5'- --------cACAUUCAAGCUAUAUACa -3' miRNA: 3'- guagaaaauUGUAGGUUCGAUAUAUG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home