Results 61 - 80 of 83 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand |
Start Position![]() |
R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 21857 | 0.97 | 0.025967 |
Target: 5'- cGUCGAAGCUAACUUGGCCcAAGCCGGc -3' miRNA: 3'- -CAGUUUCGAUUGAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 21902 | 0.71 | 0.746836 |
Target: 5'- cGUCGAAGCUAACUUGGUUcAAaCCGa -3' miRNA: 3'- -CAGUUUCGAUUGAGCCGGaUUcGGCc -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 21947 | 0.84 | 0.182786 |
Target: 5'- uGUCGAAGCU-ACUUGGCUcAAGCCGGc -3' miRNA: 3'- -CAGUUUCGAuUGAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 21991 | 0.84 | 0.173134 |
Target: 5'- cGUCGAAGCUAACUUGGCCcAAaCCGGc -3' miRNA: 3'- -CAGUUUCGAUUGAGCCGGaUUcGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 22036 | 0.85 | 0.163939 |
Target: 5'- uGUCGAAGCUAACUUGGCCaAAGCaGGc -3' miRNA: 3'- -CAGUUUCGAUUGAGCCGGaUUCGgCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 22156 | 0.67 | 0.918635 |
Target: 5'- aGUCGAGGCcugcuuuggccaaguUAGCuucgacaaauuuuaUCGaGUCUAGGCCGGu -3' miRNA: 3'- -CAGUUUCG---------------AUUG--------------AGC-CGGAUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 48928 | 0.76 | 0.487897 |
Target: 5'- -cCGAAGCUcGgUCGGCUcAAGCCGGu -3' miRNA: 3'- caGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 48972 | 0.75 | 0.55114 |
Target: 5'- aUCGAGGCUcGgUUGGCUcAAGCCGGu -3' miRNA: 3'- cAGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49017 | 0.75 | 0.55114 |
Target: 5'- aUCGAGGCUcGgUUGGCUcAAGCCGGu -3' miRNA: 3'- cAGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49050 | 0.68 | 0.905183 |
Target: 5'- aUCAAAuCUaGAC-CGGCUUGAGCCGa -3' miRNA: 3'- cAGUUUcGA-UUGaGCCGGAUUCGGCc -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49062 | 0.79 | 0.347502 |
Target: 5'- aUCGAGGCUcGgUCGGCUcAAGCCGGu -3' miRNA: 3'- cAGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49107 | 0.75 | 0.55114 |
Target: 5'- aUCGAGGCUcGgUUGGCUcAAGCCGGu -3' miRNA: 3'- cAGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49152 | 0.75 | 0.55114 |
Target: 5'- aUCGAGGCUcGgUUGGCUcAAGCCGGu -3' miRNA: 3'- cAGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49185 | 0.68 | 0.905183 |
Target: 5'- aUCAAAuCUaGAC-CGGCUUGAGCCGa -3' miRNA: 3'- cAGUUUcGA-UUGaGCCGGAUUCGGCc -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49197 | 0.79 | 0.347502 |
Target: 5'- aUCGAGGCUcGgUCGGCUcAAGCCGGu -3' miRNA: 3'- cAGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49242 | 0.74 | 0.627674 |
Target: 5'- aUUGAGGCUcGgUCGGCUcAAGCCGGu -3' miRNA: 3'- cAGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49287 | 0.79 | 0.347502 |
Target: 5'- aUCGAGGCUcGgUCGGCUcAAGCCGGu -3' miRNA: 3'- cAGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49320 | 0.68 | 0.905183 |
Target: 5'- aUCAAAuCUaGAC-CGGCUUGAGCCGa -3' miRNA: 3'- cAGUUUcGA-UUGaGCCGGAUUCGGCc -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49332 | 0.79 | 0.347502 |
Target: 5'- aUCGAGGCUcGgUCGGCUcAAGCCGGu -3' miRNA: 3'- cAGUUUCGAuUgAGCCGGaUUCGGCC- -5' |
|||||||
28322 | 5' | -51.2 | NC_005905.1 | + | 49365 | 0.67 | 0.924028 |
Target: 5'- aUCAAGuCUaGAC-CGGCUUGAGCCGa -3' miRNA: 3'- cAGUUUcGA-UUGaGCCGGAUUCGGCc -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home