Results 101 - 107 of 107 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand |
Start Position![]() |
R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 49062 | 0.71 | 0.533723 |
Target: 5'- --aUCGAGGCUcGgUcGGCUCAAGCCg -3' miRNA: 3'- aacAGCUUCGAuCgAaCCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 49107 | 0.79 | 0.200477 |
Target: 5'- --aUCGAGGCUcGgUUGGCUCAAGCCg -3' miRNA: 3'- aacAGCUUCGAuCgAACCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 49152 | 0.79 | 0.200477 |
Target: 5'- --aUCGAGGCUcGgUUGGCUCAAGCCg -3' miRNA: 3'- aacAGCUUCGAuCgAACCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 49197 | 0.71 | 0.533723 |
Target: 5'- --aUCGAGGCUcGgUcGGCUCAAGCCg -3' miRNA: 3'- aacAGCUUCGAuCgAaCCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 49242 | 0.68 | 0.760735 |
Target: 5'- --aUUGAGGCUcGgUcGGCUCAAGCCg -3' miRNA: 3'- aacAGCUUCGAuCgAaCCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 49287 | 0.71 | 0.533723 |
Target: 5'- --aUCGAGGCUcGgUcGGCUCAAGCCg -3' miRNA: 3'- aacAGCUUCGAuCgAaCCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 49332 | 0.71 | 0.533723 |
Target: 5'- --aUCGAGGCUcGgUcGGCUCAAGCCg -3' miRNA: 3'- aacAGCUUCGAuCgAaCCGGGUUCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home