Results 41 - 60 of 107 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 17644 | 0.72 | 0.512594 |
Target: 5'- -aGUCcAGGCcGGCUUGGaCCAAGCUa -3' miRNA: 3'- aaCAGcUUCGaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 19957 | 0.75 | 0.359341 |
Target: 5'- -aGUCcAGGCcGGCUUGGgCCAAGCUa -3' miRNA: 3'- aaCAGcUUCGaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 17433 | 0.76 | 0.310707 |
Target: 5'- uUUGaUCGAgaccaGGUUGGCUUGGgCCAAGCUa -3' miRNA: 3'- -AAC-AGCU-----UCGAUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 11156 | 0.66 | 0.862976 |
Target: 5'- uUUGcCGAguccAGaCcGGCUUGGgCCAAGCUa -3' miRNA: 3'- -AACaGCU----UC-GaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 20070 | 1.1 | 0.001557 |
Target: 5'- uUUGUCGAGGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- -AACAGCUUCGAUCGAACCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 11221 | 0.66 | 0.862976 |
Target: 5'- uUUGcCGAguccAGaCcGGCUUGGgCCAAGCUa -3' miRNA: 3'- -AACaGCU----UC-GaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 11286 | 0.66 | 0.862976 |
Target: 5'- uUUGcCGAguccAGaCcGGCUUGGgCCAAGCUa -3' miRNA: 3'- -AACaGCU----UC-GaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 11351 | 0.66 | 0.862976 |
Target: 5'- uUUGcCGAguccAGaCcGGCUUGGgCCAAGCUa -3' miRNA: 3'- -AACaGCU----UC-GaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 11416 | 0.66 | 0.862976 |
Target: 5'- uUUGcCGAguccAGaCcGGCUUGGgCCAAGCUa -3' miRNA: 3'- -AACaGCU----UC-GaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 11481 | 0.66 | 0.862976 |
Target: 5'- uUUGcCGAguccAGaCcGGCUUGGgCCAAGCUa -3' miRNA: 3'- -AACaGCU----UC-GaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 11546 | 0.66 | 0.862976 |
Target: 5'- uUUGcCGAguccAGaCcGGCUUGGgCCAAGCUa -3' miRNA: 3'- -AACaGCU----UC-GaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 11091 | 0.66 | 0.862976 |
Target: 5'- uUUGcCGAguccAGaCcGGCUUGGgCCAAGCUa -3' miRNA: 3'- -AACaGCU----UC-GaUCGAACCgGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 49242 | 0.68 | 0.760735 |
Target: 5'- --aUUGAGGCUcGgUcGGCUCAAGCCg -3' miRNA: 3'- aacAGCUUCGAuCgAaCCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 21720 | 0.88 | 0.053353 |
Target: 5'- cUUGUCGAAGCUAaCUUGGUUCAAGCCg -3' miRNA: 3'- -AACAGCUUCGAUcGAACCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 21991 | 0.87 | 0.063505 |
Target: 5'- -cGUCGAAGCUAaCUUGGCCCAaaccGGCCu -3' miRNA: 3'- aaCAGCUUCGAUcGAACCGGGU----UCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 19399 | 0.85 | 0.077712 |
Target: 5'- --aUCcAGGCUAGCUUGGUCCAAGCCg -3' miRNA: 3'- aacAGcUUCGAUCGAACCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 21677 | 0.84 | 0.097671 |
Target: 5'- -cGUCGAAGCUAaCUUGGCCaAAGCCg -3' miRNA: 3'- aaCAGCUUCGAUcGAACCGGgUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 19506 | 1.1 | 0.001424 |
Target: 5'- uUUGUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- -AACAGCUUCGAUCGAACCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 17083 | 1.07 | 0.002667 |
Target: 5'- uUUGUUGAAGCUAGCUUGGCCCAAGCCa -3' miRNA: 3'- -AACAGCUUCGAUCGAACCGGGUUCGG- -5' |
|||||||
28324 | 5' | -53.9 | NC_005905.1 | + | 22034 | 0.84 | 0.097671 |
Target: 5'- uUUGUCGAAGCUAaCUUGGCCaaagCAGGCCu -3' miRNA: 3'- -AACAGCUUCGAUcGAACCGG----GUUCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home