Results 81 - 100 of 103 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 49345 | 0.74 | 0.233296 |
Target: 5'- cGGCUCAAGCCGGUCcaGAUUUGAUAAa -3' miRNA: 3'- -CCGGGUUCGGCCGGacCUGAGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 17824 | 0.72 | 0.320289 |
Target: 5'- uGGCCCAAaCCGGaCUGGACUUuAUAAa -3' miRNA: 3'- -CCGGGUUcGGCCgGACCUGAGcUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 17773 | 0.72 | 0.335649 |
Target: 5'- -aUCCAGGCCGGCUUGGACcaagcuagcuUCGAc-- -3' miRNA: 3'- ccGGGUUCGGCCGGACCUG----------AGCUauu -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 20067 | 0.71 | 0.384897 |
Target: 5'- aGUCCAGGUCGGCUUGGGCcaagcuagcuUCGAc-- -3' miRNA: 3'- cCGGGUUCGGCCGGACCUG----------AGCUauu -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 9055 | 0.71 | 0.384897 |
Target: 5'- aGUCCAGGUCGGCUUGGGCcaagcuagcuUCGAc-- -3' miRNA: 3'- cCGGGUUCGGCCGGACCUG----------AGCUauu -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 21886 | 0.71 | 0.351541 |
Target: 5'- aGUCUAGGCCGGCUUGGGCcaaguuagcuUCGAc-- -3' miRNA: 3'- cCGGGUUCGGCCGGACCUG----------AGCUauu -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 21931 | 0.71 | 0.351541 |
Target: 5'- aGUCUAGGCCGGCUUGGGCcaaguuagcuUCGAc-- -3' miRNA: 3'- cCGGGUUCGGCCGGACCUG----------AGCUauu -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 21976 | 0.71 | 0.351541 |
Target: 5'- aGUCUAGGCCGGCUUGGGCcaaguuagcuUCGAc-- -3' miRNA: 3'- cCGGGUUCGGCCGGACCUG----------AGCUauu -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11098 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11358 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11423 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11488 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11553 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11618 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11683 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11748 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11813 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAg -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11228 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11163 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
|||||||
28325 | 3' | -58.2 | NC_005905.1 | + | 11293 | 0.7 | 0.438695 |
Target: 5'- aGUCCAGaCCGGCUUGGGCcaagcuagcuUCGAUAAa -3' miRNA: 3'- cCGGGUUcGGCCGGACCUG----------AGCUAUU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home