miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28499	3'	-52.4	NC_005946.1	+	34185	0.66	0.937085
	Target:  5'- gAGGAGGGACguauccCUGACuguGAaGCAGUCc- -3' miRNA:   3'- -UUCUCUCUGa-----GACUGu--CU-CGUCAGuc -5'
28499	3'	-52.4	NC_005946.1	+	93135	0.66	0.926184
	Target:  5'- uGGGGGGACggcgCUGugcuCAGGGCGGagGGa -3' miRNA:   3'- uUCUCUCUGa---GACu---GUCUCGUCagUC- -5'
28499	3'	-52.4	NC_005946.1	+	19028	0.68	0.847223
	Target:  5'- -uGAG-GACugUCUGG-GGAGCAGUCAGg -3' miRNA:   3'- uuCUCuCUG--AGACUgUCUCGUCAGUC- -5'
28499	3'	-52.4	NC_005946.1	+	7949	0.7	0.772553
	Target:  5'- gGAGGGAGACgaCUGGCAGGGcCAGgccgcugucUCGGa -3' miRNA:   3'- -UUCUCUCUGa-GACUGUCUC-GUC---------AGUC- -5'
28499	3'	-52.4	NC_005946.1	+	79732	0.71	0.731443
	Target:  5'- cAGAGAGGCUCuggUGAguGAGCcucucGUCGGa -3' miRNA:   3'- uUCUCUCUGAG---ACUguCUCGu----CAGUC- -5'
28499	3'	-52.4	NC_005946.1	+	91303	0.71	0.731443
	Target:  5'- cGGAGAGACUUUcGAgCAGAGCcuggcGUCGGa -3' miRNA:   3'- uUCUCUCUGAGA-CU-GUCUCGu----CAGUC- -5'
28499	3'	-52.4	NC_005946.1	+	101826	0.71	0.688758
	Target:  5'- uGAGGGuGAC-CUGACAGGGCuGUCc- -3' miRNA:   3'- -UUCUCuCUGaGACUGUCUCGuCAGuc -5'
28499	3'	-52.4	NC_005946.1	+	93831	0.73	0.601468
	Target:  5'- uGAGGGAGAUgagggagCUGGCGGAGCAGg--- -3' miRNA:   3'- -UUCUCUCUGa------GACUGUCUCGUCaguc -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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