Results 121 - 140 of 187 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 75635 | 0.67 | 0.987339 |
Target: 5'- gAAGGCCAuauAGCUugcagaGGCCAAGgaCCg -3' miRNA: 3'- gUUUCGGU---UUGAcag---CCGGUUCgaGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 19264 | 0.67 | 0.987339 |
Target: 5'- ---cGCCAGGCgggGUcCGGCCu--CUCCu -3' miRNA: 3'- guuuCGGUUUGa--CA-GCCGGuucGAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 20707 | 0.67 | 0.987339 |
Target: 5'- gCAAGGCCAuuaagaAGCUGcuggCGGCCugcGAGgaCCc -3' miRNA: 3'- -GUUUCGGU------UUGACa---GCCGG---UUCgaGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 74572 | 0.67 | 0.985671 |
Target: 5'- ----aCCGGGCUGUCgaaGGUCAcuGCUCCg -3' miRNA: 3'- guuucGGUUUGACAG---CCGGUu-CGAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 60789 | 0.67 | 0.985671 |
Target: 5'- gGGAGCCGGACcagGUCcagGGCCu-GgUCCg -3' miRNA: 3'- gUUUCGGUUUGa--CAG---CCGGuuCgAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 73508 | 0.67 | 0.98514 |
Target: 5'- gCGGGGUCAcGCgcaggcuuacuuuuUGcaUGGCCAGGCUCCg -3' miRNA: 3'- -GUUUCGGUuUG--------------ACa-GCCGGUUCGAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 64194 | 0.67 | 0.98384 |
Target: 5'- aGGAGUugCAAGgUGUC-GCgGAGCUCCg -3' miRNA: 3'- gUUUCG--GUUUgACAGcCGgUUCGAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 157963 | 0.67 | 0.98384 |
Target: 5'- cCAAGGCCAccgGGCgg--GGCCAGGgcCUCCa -3' miRNA: 3'- -GUUUCGGU---UUGacagCCGGUUC--GAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 154885 | 0.67 | 0.98384 |
Target: 5'- cCAAGGCCAccgGGCgg--GGCCAGGgcCUCCa -3' miRNA: 3'- -GUUUCGGU---UUGacagCCGGUUC--GAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 151807 | 0.67 | 0.98384 |
Target: 5'- cCAAGGCCAccgGGCgg--GGCCAGGgcCUCCa -3' miRNA: 3'- -GUUUCGGU---UUGacagCCGGUUC--GAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 13566 | 0.67 | 0.987339 |
Target: 5'- ---cGCCGGGCUGcgcaagcaGGCCGggGGCUCa -3' miRNA: 3'- guuuCGGUUUGACag------CCGGU--UCGAGg -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 145652 | 0.67 | 0.98384 |
Target: 5'- cCAAGGCCAccgGGCgg--GGCCAGGgcCUCCa -3' miRNA: 3'- -GUUUCGGU---UUGacagCCGGUUC--GAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 22342 | 0.67 | 0.987339 |
Target: 5'- ---cGCCAGGCgggGUcCGGCCu--CUCCu -3' miRNA: 3'- guuuCGGUUUGa--CA-GCCGGuucGAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 28498 | 0.67 | 0.987339 |
Target: 5'- ---cGCCAGGCgggGUcCGGCCu--CUCCu -3' miRNA: 3'- guuuCGGUUUGa--CA-GCCGGuucGAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 101419 | 0.67 | 0.979654 |
Target: 5'- aCGAGGCgGucuuCgucUCGGCCAAGCUgCa -3' miRNA: 3'- -GUUUCGgUuu--Gac-AGCCGGUUCGAgG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 119292 | 0.67 | 0.981627 |
Target: 5'- aCGGAcGCCGAAgUGUgguacgcUGGCCccucuGGCUCCc -3' miRNA: 3'- -GUUU-CGGUUUgACA-------GCCGGu----UCGAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 3877 | 0.67 | 0.98384 |
Target: 5'- aGAAGCU--GCUGgucUCGGCgAGGC-CCa -3' miRNA: 3'- gUUUCGGuuUGAC---AGCCGgUUCGaGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 160605 | 0.67 | 0.985671 |
Target: 5'- ---uGCCcccgagGUCGGCCGccuggcaugccAGCUCCg -3' miRNA: 3'- guuuCGGuuuga-CAGCCGGU-----------UCGAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 43741 | 0.67 | 0.987339 |
Target: 5'- -cGGGCCAggUgGUCGcgcaugacGCCGuccAGCUCCa -3' miRNA: 3'- guUUCGGUuuGaCAGC--------CGGU---UCGAGG- -5' |
|||||||
28726 | 5' | -51.2 | NC_006146.1 | + | 148729 | 0.67 | 0.98384 |
Target: 5'- cCAAGGCCAccgGGCgg--GGCCAGGgcCUCCa -3' miRNA: 3'- -GUUUCGGU---UUGacagCCGGUUC--GAGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home