miRNA display CGI

Results 181 - 187 of 187 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28726	5'	-51.2	NC_006146.1	+	165789	0.66	0.992564
	Target:  5'- uCAGAGCCAcGgUGgcaCGGCCGgcuaggggGGCgUCCc -3' miRNA:   3'- -GUUUCGGUuUgACa--GCCGGU--------UCG-AGG- -5'
28726	5'	-51.2	NC_006146.1	+	167580	0.71	0.914513
	Target:  5'- aGAGGCC-GugUGUggaGGCCGGGcCUCCc -3' miRNA:   3'- gUUUCGGuUugACAg--CCGGUUC-GAGG- -5'
28726	5'	-51.2	NC_006146.1	+	168512	0.71	0.914513
	Target:  5'- aGAGGCC-GugUGUggaGGCCGGGcCUCCc -3' miRNA:   3'- gUUUCGGuUugACAg--CCGGUUC-GAGG- -5'
28726	5'	-51.2	NC_006146.1	+	168598	0.75	0.719172
	Target:  5'- --uGGCCugGAACUGUCggaaggagGGCCuGGCUCCg -3' miRNA:   3'- guuUCGG--UUUGACAG--------CCGGuUCGAGG- -5'
28726	5'	-51.2	NC_006146.1	+	168639	1.03	0.020065
	Target:  5'- uCAAAGCCAAACUGUCGGCCAAGC-CCa -3' miRNA:   3'- -GUUUCGGUUUGACAGCCGGUUCGaGG- -5'
28726	5'	-51.2	NC_006146.1	+	169444	0.71	0.914513
	Target:  5'- aGAGGCC-GugUGUggaGGCCGGGcCUCCc -3' miRNA:   3'- gUUUCGGuUugACAg--CCGGUUC-GAGG- -5'
28726	5'	-51.2	NC_006146.1	+	170375	0.71	0.914513
	Target:  5'- aGAGGCC-GugUGUggaGGCCGGGcCUCCc -3' miRNA:   3'- gUUUCGGuUugACAg--CCGGUUC-GAGG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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