Results 181 - 187 of 187 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 28726 | 5' | -51.2 | NC_006146.1 | + | 29607 | 0.7 | 0.920427 |
|
Target: 5'- --cAGCCAGGCUGaacCcGCCAAuGCUCCc -3' miRNA: 3'- guuUCGGUUUGACa--GcCGGUU-CGAGG- -5' |
|||||||
| 28726 | 5' | -51.2 | NC_006146.1 | + | 111627 | 0.7 | 0.931491 |
|
Target: 5'- --cAGCCcagguccgcgaAGAC-GUCGGCCAGGC-CCu -3' miRNA: 3'- guuUCGG-----------UUUGaCAGCCGGUUCGaGG- -5' |
|||||||
| 28726 | 5' | -51.2 | NC_006146.1 | + | 123259 | 0.7 | 0.936641 |
|
Target: 5'- -uGGGCCGGGCcG-CGGCCAgagacGGCUCg -3' miRNA: 3'- guUUCGGUUUGaCaGCCGGU-----UCGAGg -5' |
|||||||
| 28726 | 5' | -51.2 | NC_006146.1 | + | 120538 | 0.7 | 0.941537 |
|
Target: 5'- --cGGCgGGACUGcUGGCCAAGaUCCc -3' miRNA: 3'- guuUCGgUUUGACaGCCGGUUCgAGG- -5' |
|||||||
| 28726 | 5' | -51.2 | NC_006146.1 | + | 11443 | 0.69 | 0.946182 |
|
Target: 5'- --uGGCCAAGgUGgCGGCCcucaagGAGUUCCc -3' miRNA: 3'- guuUCGGUUUgACaGCCGG------UUCGAGG- -5' |
|||||||
| 28726 | 5' | -51.2 | NC_006146.1 | + | 45657 | 0.69 | 0.946182 |
|
Target: 5'- aCAGAGUCcGGCgccaGGCCAguGGCUCCc -3' miRNA: 3'- -GUUUCGGuUUGacagCCGGU--UCGAGG- -5' |
|||||||
| 28726 | 5' | -51.2 | NC_006146.1 | + | 168639 | 1.03 | 0.020065 |
|
Target: 5'- uCAAAGCCAAACUGUCGGCCAAGC-CCa -3' miRNA: 3'- -GUUUCGGUUUGACAGCCGGUUCGaGG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home