Results 61 - 80 of 122 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 136937 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 137030 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 137216 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 137123 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 137309 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 136008 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 136194 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 136287 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 135822 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 135544 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 135451 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 135358 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 135265 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 135172 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 136101 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 135915 | 0.68 | 0.782898 |
Target: 5'- gUCCUGGaGcUCGGGGCCggggGCCgg-GUGCc -3' miRNA: 3'- -AGGACC-CaGGUCCCGG----CGGuaaUACG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 115832 | 0.68 | 0.764449 |
Target: 5'- gUCCcugcugUGGGUCCGauacGGCCGCCugug-GCa -3' miRNA: 3'- -AGG------ACCCAGGUc---CCGGCGGuaauaCG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 115507 | 0.69 | 0.735941 |
Target: 5'- gUCCUgGGGUCCcGGaGCagcguGCCAUUGcGCu -3' miRNA: 3'- -AGGA-CCCAGGuCC-CGg----CGGUAAUaCG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 142582 | 0.69 | 0.706643 |
Target: 5'- aCCgggcgGGG-CCAGGGCCuCCAgag-GCa -3' miRNA: 3'- aGGa----CCCaGGUCCCGGcGGUaauaCG- -5' |
|||||||
28745 | 3' | -57.5 | NC_006146.1 | + | 148737 | 0.69 | 0.706643 |
Target: 5'- aCCgggcgGGG-CCAGGGCCuCCAgag-GCa -3' miRNA: 3'- aGGa----CCCaGGUCCCGGcGGUaauaCG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home