miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28770	3'	-55.5	NC_006146.1	+	137909	0.67	0.901137
	Target:  5'- cGGGGGUaGCGGCg---GCaCUGAAAUu -3' miRNA:   3'- -CCCCCAgCGUCGaugaCGcGACUUUG- -5'
28770	3'	-55.5	NC_006146.1	+	156729	0.66	0.919215
	Target:  5'- cGGGGGUC-CAGCcug-GCGCaGAcGCu -3' miRNA:   3'- -CCCCCAGcGUCGaugaCGCGaCUuUG- -5'
28770	3'	-55.5	NC_006146.1	+	39747	0.66	0.930073
	Target:  5'- uGGuGGGUUuCGGCUGgaG-GCUGggGCu -3' miRNA:   3'- -CC-CCCAGcGUCGAUgaCgCGACuuUG- -5'
28770	3'	-55.5	NC_006146.1	+	159368	0.66	0.919215
	Target:  5'- cGGGGG-CGUAGCUgaccgccaGCUcgcaggccGCGCUGuccACg -3' miRNA:   3'- -CCCCCaGCGUCGA--------UGA--------CGCGACuu-UG- -5'
28770	3'	-55.5	NC_006146.1	+	146026	0.66	0.913427
	Target:  5'- aGGGGG--GCAGCUccuggcACUGCGCguccAGCu -3' miRNA:   3'- -CCCCCagCGUCGA------UGACGCGacu-UUG- -5'
28770	3'	-55.5	NC_006146.1	+	39536	0.66	0.924764
	Target:  5'- uGGGGGagGCGGCgcaaGgGCUGGAu- -3' miRNA:   3'- -CCCCCagCGUCGaugaCgCGACUUug -5'
28770	3'	-55.5	NC_006146.1	+	92084	0.66	0.930073
	Target:  5'- uGGGGGgcggCcCGGCcugggGCUGCuGCUGggGg -3' miRNA:   3'- -CCCCCa---GcGUCGa----UGACG-CGACuuUg -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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