Results 81 - 100 of 127 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
28774 | 3' | -65 | NC_006146.1 | + | 135424 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 135517 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 135610 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 135795 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 135888 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 135981 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 136260 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 136539 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 41874 | 0.67 | 0.497264 |
Target: 5'- gCUCGGGCUGCg--CcGuGCCCCggACCUGa -3' miRNA: 3'- -GAGCCCGGCGagaGaC-CGGGG--UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 137468 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 137189 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 137096 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 137003 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 136910 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 136817 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 137375 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 136632 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 136446 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 136353 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
|||||||
28774 | 3' | -65 | NC_006146.1 | + | 136167 | 0.67 | 0.497264 |
Target: 5'- -cCGGGCCGCUgC-CgGGUCCgCuGCCCGg -3' miRNA: 3'- gaGCCCGGCGA-GaGaCCGGG-G-UGGGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home