Results 61 - 64 of 64 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
2884 | 5' | -49.8 | NC_001493.1 | + | 126252 | 0.92 | 0.10615 |
Target: 5'- uCUAAGUCUC-ACCCGAUCCCGAAAAUc -3' miRNA: 3'- -GAUUCAGAGcUGGGCUAGGGCUUUUA- -5' |
|||||||
2884 | 5' | -49.8 | NC_001493.1 | + | 126174 | 1 | 0.038349 |
Target: 5'- -cGGGUCUCGACCCGAUCCCGAAAAUc -3' miRNA: 3'- gaUUCAGAGCUGGGCUAGGGCUUUUA- -5' |
|||||||
2884 | 5' | -49.8 | NC_001493.1 | + | 10619 | 1 | 0.038349 |
Target: 5'- -cGGGUCUCGACCCGAUCCCGAAAAUc -3' miRNA: 3'- gaUUCAGAGCUGGGCUAGGGCUUUUA- -5' |
|||||||
2884 | 5' | -49.8 | NC_001493.1 | + | 10698 | 1.06 | 0.016588 |
Target: 5'- uCUAAGUCUCGACCCGAUCCCGAAAAUc -3' miRNA: 3'- -GAUUCAGAGCUGGGCUAGGGCUUUUA- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home