Results 61 - 80 of 146 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28903 | 5' | -47 | NC_006146.1 | + | 159830 | 0.67 | 0.999595 |
Target: 5'- uCGCgGguGGGGCAAccuGUGGgcgGGugGGUGGu -3' miRNA: 3'- -GUG-CguUCCCGUU---UACU---UCugUUACC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 101859 | 0.67 | 0.999595 |
Target: 5'- -cCGCAccacgGGuGGCGGGgcGAGGACGGUGGc -3' miRNA: 3'- guGCGU-----UC-CCGUUUa-CUUCUGUUACC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 1069 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuuaGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 1037 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuuaGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 1005 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuucGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 138 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuucGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 106 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuucGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 10 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuucGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 135947 | 0.68 | 0.998746 |
Target: 5'- gCACGCAGGGGUgccacgucaccccgGGGUGcugggguGGGgGAUGGg -3' miRNA: 3'- -GUGCGUUCCCG--------------UUUACu------UCUgUUACC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 32117 | 0.68 | 0.998746 |
Target: 5'- gCACGCAGGGGUgccacgucaccccgGGGUGcugggguGGGgGAUGGg -3' miRNA: 3'- -GUGCGUUCCCG--------------UUUACu------UCUgUUACC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 1938 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuucGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 2001 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuuaGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 13311 | 0.68 | 0.999492 |
Target: 5'- cCACGUgcuGGGCAcc--AGGGCGGUGGa -3' miRNA: 3'- -GUGCGuu-CCCGUuuacUUCUGUUACC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 74 | 0.68 | 0.999492 |
Target: 5'- uCACGCAAGGGUGAuuucGggGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CuuCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 94992 | 0.68 | 0.999034 |
Target: 5'- cCAgGCAuggGGGGCAGcUGAGGAgGugcUGGa -3' miRNA: 3'- -GUgCGU---UCCCGUUuACUUCUgUu--ACC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 69417 | 0.68 | 0.999034 |
Target: 5'- gACGagcAGGGCcaccgagcacaGGAUGggGAUGAUGGc -3' miRNA: 3'- gUGCgu-UCCCG-----------UUUACuuCUGUUACC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 72008 | 0.68 | 0.998818 |
Target: 5'- cCugGCGcGGGUGAGUagcgggGGAGugGGUGGu -3' miRNA: 3'- -GugCGUuCCCGUUUA------CUUCugUUACC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 2934 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuuaGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 2902 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuuaGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
|||||||
28903 | 5' | -47 | NC_006146.1 | + | 2870 | 0.68 | 0.998818 |
Target: 5'- uCACGCAAGGGUGAuuucGGAGAg---GGg -3' miRNA: 3'- -GUGCGUUCCCGUUua--CUUCUguuaCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home