Results 41 - 60 of 562 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 34683 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 33475 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 33568 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 35147 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 34218 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 34590 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 159541 | 0.66 | 0.621438 |
Target: 5'- ---uGCCUgacgCGCAGCgCCuGcGCCAGGCCc -3' miRNA: 3'- gcucCGGA----GUGUCG-GGuC-CGGUCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 103675 | 0.66 | 0.621438 |
Target: 5'- cCGuGGCUUC-CuguGCCUggccGGCCAGGCg -3' miRNA: 3'- -GCuCCGGAGuGu--CGGGu---CCGGUCCGg -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 125956 | 0.66 | 0.621438 |
Target: 5'- cCGGGGCCUCcccGCGcCCCuGGCCacgagAGGUUc -3' miRNA: 3'- -GCUCCGGAG---UGUcGGGuCCGG-----UCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 35612 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 158592 | 0.66 | 0.621438 |
Target: 5'- -cGGGCCUga-AGCCCGGGUUgAGGCg -3' miRNA: 3'- gcUCCGGAgugUCGGGUCCGG-UCCGg -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 55172 | 0.66 | 0.621438 |
Target: 5'- gGGGGUgacCGCGuCCCAGGCUGcGGCCg -3' miRNA: 3'- gCUCCGga-GUGUcGGGUCCGGU-CCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 155513 | 0.66 | 0.621438 |
Target: 5'- -cGGGCCUga-AGCCCGGGUUgAGGCg -3' miRNA: 3'- gcUCCGGAgugUCGGGUCCGG-UCCGg -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 51852 | 0.66 | 0.621438 |
Target: 5'- uCGGGGCCUgGCccgAGCCCGGGgaUGGGg- -3' miRNA: 3'- -GCUCCGGAgUG---UCGGGUCCg-GUCCgg -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 72574 | 0.66 | 0.621438 |
Target: 5'- -cGGGCCgcgCcCGGCCCcGuGCCAgacGGCCa -3' miRNA: 3'- gcUCCGGa--GuGUCGGGuC-CGGU---CCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 35705 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 34125 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 143201 | 0.66 | 0.621438 |
Target: 5'- -cGGGCCUga-AGCCCGGGUUgAGGCg -3' miRNA: 3'- gcUCCGGAgugUCGGGUCCGG-UCCGg -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 116037 | 0.66 | 0.621438 |
Target: 5'- -aAGGCCUcCACGGCCCGcuGCUGGGg- -3' miRNA: 3'- gcUCCGGA-GUGUCGGGUc-CGGUCCgg -5' |
|||||||
28947 | 3' | -62.9 | NC_006146.1 | + | 34311 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home