Results 121 - 140 of 562 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 32911 | 0.66 | 0.630212 |
Target: 5'- gGGGGCg-CACcccccaccccgccGGCCCccgggAGGCCcGGCCg -3' miRNA: 3'- gCUCCGgaGUG-------------UCGGG-----UCCGGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 33019 | 0.69 | 0.426935 |
Target: 5'- aCGGGGaCCcccugC-CGGCCCgGGGCgGGGCCc -3' miRNA: 3'- -GCUCC-GGa----GuGUCGGG-UCCGgUCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 33382 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 33475 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 33568 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 33661 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 33754 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 33847 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 33939 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34032 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34046 | 0.67 | 0.544238 |
Target: 5'- cCGGGGCCUaugcCGGCCgGGGgUcccguggcacgGGGCCg -3' miRNA: 3'- -GCUCCGGAgu--GUCGGgUCCgG-----------UCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34125 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34218 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34239 | 0.67 | 0.582581 |
Target: 5'- gGAGGCCgccgCAaGGaCgCCGGGCC-GGCUg -3' miRNA: 3'- gCUCCGGa---GUgUC-G-GGUCCGGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34311 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34404 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34497 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34590 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34683 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
|||||||
28990 | 3' | -62.9 | NC_006146.1 | + | 34776 | 0.66 | 0.621438 |
Target: 5'- gCGGGGCa--GCGGaCCCAGGggcaCCcGGCCc -3' miRNA: 3'- -GCUCCGgagUGUC-GGGUCC----GGuCCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home