Results 41 - 60 of 135 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 145422 | 0.66 | 0.855569 |
Target: 5'- gGCaGGCCGGgca-GGCCGGGUcuUGGGc -3' miRNA: 3'- -CG-CCGGUCaaggUCGGUCCAacGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 148500 | 0.66 | 0.855569 |
Target: 5'- gGCaGGCCGGgca-GGCCGGGUcuUGGGc -3' miRNA: 3'- -CG-CCGGUCaaggUCGGUCCAacGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 151578 | 0.66 | 0.855569 |
Target: 5'- gGCaGGCCGGgca-GGCCGGGUcuUGGGc -3' miRNA: 3'- -CG-CCGGUCaaggUCGGUCCAacGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 154656 | 0.66 | 0.855569 |
Target: 5'- gGCaGGCCGGgca-GGCCGGGUcuUGGGc -3' miRNA: 3'- -CG-CCGGUCaaggUCGGUCCAacGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 157733 | 0.66 | 0.855569 |
Target: 5'- gGCaGGCCGGgca-GGCCGGGUcuUGGGc -3' miRNA: 3'- -CG-CCGGUCaaggUCGGUCCAacGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 100758 | 0.66 | 0.823882 |
Target: 5'- cCGGCCAGg---AGCCAGGcgaagGCGGc -3' miRNA: 3'- cGCCGGUCaaggUCGGUCCaa---CGCCc -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 49866 | 0.66 | 0.823882 |
Target: 5'- aCGGcCCAGUaugUCCAGgCGGGUcuUGCGc- -3' miRNA: 3'- cGCC-GGUCA---AGGUCgGUCCA--ACGCcc -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 92275 | 0.67 | 0.789566 |
Target: 5'- cCGGCCuGGggCUgcuGCUGGGggGCGGGc -3' miRNA: 3'- cGCCGG-UCaaGGu--CGGUCCaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 92305 | 0.67 | 0.789566 |
Target: 5'- cCGGCCuGGggCUgcuGCUGGGggGCGGGc -3' miRNA: 3'- cGCCGG-UCaaGGu--CGGUCCaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 103695 | 0.67 | 0.789566 |
Target: 5'- cCGGCCAGgcgaCCGGCCAcGGccaGUGGa -3' miRNA: 3'- cGCCGGUCaa--GGUCGGU-CCaa-CGCCc -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 124131 | 0.67 | 0.789566 |
Target: 5'- cCGGCCAGccaUCCGcCCGGGgu-CGGGa -3' miRNA: 3'- cGCCGGUCa--AGGUcGGUCCaacGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 104408 | 0.67 | 0.795741 |
Target: 5'- cCGGCCGGUgcaUCCGGCUgccgcauaccuacaAGGUggacagggGCGGc -3' miRNA: 3'- cGCCGGUCA---AGGUCGG--------------UCCAa-------CGCCc -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 126176 | 0.67 | 0.796617 |
Target: 5'- cGCGGCCAccgcaucaggCCGGCCA----GCGGGg -3' miRNA: 3'- -CGCCGGUcaa-------GGUCGGUccaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 39833 | 0.67 | 0.798366 |
Target: 5'- gGCGGCCucggccgcacAGUgggCCGGCgGGGgcugugUGCccGGGg -3' miRNA: 3'- -CGCCGG----------UCAa--GGUCGgUCCa-----ACG--CCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 141454 | 0.67 | 0.801847 |
Target: 5'- aGUGGCCAGggaggacggagGGCCuGGccUGCGGGg -3' miRNA: 3'- -CGCCGGUCaagg-------UCGGuCCa-ACGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 144532 | 0.67 | 0.801847 |
Target: 5'- aGUGGCCAGggaggacggagGGCCuGGccUGCGGGg -3' miRNA: 3'- -CGCCGGUCaagg-------UCGGuCCa-ACGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 147610 | 0.67 | 0.801847 |
Target: 5'- aGUGGCCAGggaggacggagGGCCuGGccUGCGGGg -3' miRNA: 3'- -CGCCGGUCaagg-------UCGGuCCa-ACGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 153765 | 0.67 | 0.801847 |
Target: 5'- aGUGGCCAGggaggacggagGGCCuGGccUGCGGGg -3' miRNA: 3'- -CGCCGGUCaagg-------UCGGuCCa-ACGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 137613 | 0.67 | 0.804442 |
Target: 5'- gGCGGCgCAGcggugcCCAGCCGGgccaccccccacccGgaGCGGGg -3' miRNA: 3'- -CGCCG-GUCaa----GGUCGGUC--------------CaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 156843 | 0.67 | 0.801847 |
Target: 5'- aGUGGCCAGggaggacggagGGCCuGGccUGCGGGg -3' miRNA: 3'- -CGCCGGUCaagg-------UCGGuCCa-ACGCCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home