Results 61 - 80 of 135 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 92185 | 0.67 | 0.789566 |
Target: 5'- cCGGCCuGGggCUgcuGCUGGGggGCGGGc -3' miRNA: 3'- cGCCGG-UCaaGGu--CGGUCCaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 92215 | 0.67 | 0.789566 |
Target: 5'- cCGGCCuGGggCUgcuGCUGGGggGCGGGc -3' miRNA: 3'- cGCCGG-UCaaGGu--CGGUCCaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 92245 | 0.67 | 0.789566 |
Target: 5'- cCGGCCuGUggCUgcuGCUGGGggGCGGGc -3' miRNA: 3'- cGCCGGuCAa-GGu--CGGUCCaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 92275 | 0.67 | 0.789566 |
Target: 5'- cCGGCCuGGggCUgcuGCUGGGggGCGGGc -3' miRNA: 3'- cGCCGG-UCaaGGu--CGGUCCaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 92305 | 0.67 | 0.789566 |
Target: 5'- cCGGCCuGGggCUgcuGCUGGGggGCGGGc -3' miRNA: 3'- cGCCGG-UCaaGGu--CGGUCCaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 103695 | 0.67 | 0.789566 |
Target: 5'- cCGGCCAGgcgaCCGGCCAcGGccaGUGGa -3' miRNA: 3'- cGCCGGUCaa--GGUCGGU-CCaa-CGCCc -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 147610 | 0.67 | 0.801847 |
Target: 5'- aGUGGCCAGggaggacggagGGCCuGGccUGCGGGg -3' miRNA: 3'- -CGCCGGUCaagg-------UCGGuCCa-ACGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 144532 | 0.67 | 0.801847 |
Target: 5'- aGUGGCCAGggaggacggagGGCCuGGccUGCGGGg -3' miRNA: 3'- -CGCCGGUCaagg-------UCGGuCCa-ACGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 141454 | 0.67 | 0.801847 |
Target: 5'- aGUGGCCAGggaggacggagGGCCuGGccUGCGGGg -3' miRNA: 3'- -CGCCGGUCaagg-------UCGGuCCa-ACGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 39833 | 0.67 | 0.798366 |
Target: 5'- gGCGGCCucggccgcacAGUgggCCGGCgGGGgcugugUGCccGGGg -3' miRNA: 3'- -CGCCGG----------UCAa--GGUCGgUCCa-----ACG--CCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 126176 | 0.67 | 0.796617 |
Target: 5'- cGCGGCCAccgcaucaggCCGGCCA----GCGGGg -3' miRNA: 3'- -CGCCGGUcaa-------GGUCGGUccaaCGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 104408 | 0.67 | 0.795741 |
Target: 5'- cCGGCCGGUgcaUCCGGCUgccgcauaccuacaAGGUggacagggGCGGc -3' miRNA: 3'- cGCCGGUCA---AGGUCGG--------------UCCAa-------CGCCc -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 124131 | 0.67 | 0.789566 |
Target: 5'- cCGGCCAGccaUCCGcCCGGGgu-CGGGa -3' miRNA: 3'- cGCCGGUCa--AGGUcGGUCCaacGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 137970 | 0.72 | 0.518593 |
Target: 5'- cGCGGCCGGg-CCucCCGGGggcccgGCGGGg -3' miRNA: 3'- -CGCCGGUCaaGGucGGUCCaa----CGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 34139 | 0.72 | 0.512897 |
Target: 5'- cGCGGCCGGgccucccggagccCCGGCgAGGgUGgGGGg -3' miRNA: 3'- -CGCCGGUCaa-----------GGUCGgUCCaACgCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 45119 | 0.72 | 0.509113 |
Target: 5'- uCGGCCGGUgaCC-GCCGGGagccuugggcuUUGCGGGc -3' miRNA: 3'- cGCCGGUCAa-GGuCGGUCC-----------AACGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 33094 | 0.73 | 0.47197 |
Target: 5'- uGCGGCUcuGGgg-CAGCCGGGUggccgccgGCGGGu -3' miRNA: 3'- -CGCCGG--UCaagGUCGGUCCAa-------CGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 48341 | 0.73 | 0.427562 |
Target: 5'- -gGGCCAGgcgUCCAGUCuGGccaGCGGGc -3' miRNA: 3'- cgCCGGUCa--AGGUCGGuCCaa-CGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 57035 | 0.74 | 0.41898 |
Target: 5'- aCGGCCGGggcgaagCC-GCCAGGguugagGCGGGa -3' miRNA: 3'- cGCCGGUCaa-----GGuCGGUCCaa----CGCCC- -5' |
|||||||
29014 | 5' | -58.6 | NC_006146.1 | + | 162394 | 0.66 | 0.855569 |
Target: 5'- cGCGcCCGGgaCCccggugGGCCAGGaugGUGGGg -3' miRNA: 3'- -CGCcGGUCaaGG------UCGGUCCaa-CGCCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home