Results 41 - 60 of 167 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand |
Start Position![]() |
R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 34406 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 34499 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 34592 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 34685 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 34778 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 34871 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 34963 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 35056 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 35149 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 35242 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 35335 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 35428 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 35521 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 35614 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 35707 | 0.75 | 0.619804 |
Target: 5'- gGGGCAGCGgacCCAGGGGCACCcGgcccCCGg -3' miRNA: 3'- gCCCGUCGU---GGUUUUUGUGGaCa---GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 40110 | 0.67 | 0.960914 |
Target: 5'- cCGGaGcCGGCGCCuguuucuGGGACACC-GUCUGg -3' miRNA: 3'- -GCC-C-GUCGUGGu------UUUUGUGGaCAGGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 41222 | 0.68 | 0.930227 |
Target: 5'- uCGaGGCGGCGCUGAAGAgACCgGcCCu -3' miRNA: 3'- -GC-CCGUCGUGGUUUUUgUGGaCaGGc -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 41762 | 0.66 | 0.973434 |
Target: 5'- uGGGCuuccCGCCGGAGGC-CCUGcgcCCGg -3' miRNA: 3'- gCCCGuc--GUGGUUUUUGuGGACa--GGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 42537 | 0.66 | 0.978466 |
Target: 5'- -uGGC-GUACUggGAGGGgGCCUGUCCGu -3' miRNA: 3'- gcCCGuCGUGG--UUUUUgUGGACAGGC- -5' |
|||||||
29079 | 3' | -53.4 | NC_006146.1 | + | 42782 | 0.66 | 0.976047 |
Target: 5'- uCGuGGCucGCGCCuccuGGACGCCauUGUCCc -3' miRNA: 3'- -GC-CCGu-CGUGGuu--UUUGUGG--ACAGGc -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home