Results 61 - 79 of 79 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
29080 | 5' | -53 | NC_006146.1 | + | 135221 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 135128 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 136150 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 136243 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 136800 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 137265 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 137172 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 137079 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 136893 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 136615 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 136522 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 136429 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 137358 | 0.71 | 0.875022 |
Target: 5'- gCUCcgGCGGgGGGUGGCcgggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua----GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 115429 | 0.71 | 0.852335 |
Target: 5'- gCCUCGUucucGCccgcggccaucgAGCGGGUGGCcacgGUaCUGCUg -3' miRNA: 3'- -GGAGCA----UG------------UCGCCCACCGa---UA-GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 136708 | 0.71 | 0.844364 |
Target: 5'- gCUCcgGCGGgGGGUGGCcggccgCUGCCg -3' miRNA: 3'- gGAGcaUGUCgCCCACCGaua---GAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 89452 | 0.74 | 0.726059 |
Target: 5'- cCCggCGUGaAGCuGGUGGUUGUUUGCCa -3' miRNA: 3'- -GGa-GCAUgUCGcCCACCGAUAGAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 27335 | 0.74 | 0.724081 |
Target: 5'- cCCUCcaaaaACAGCGGGUGGCgcggcaagGCCg -3' miRNA: 3'- -GGAGca---UGUCGCCCACCGauaga---UGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 39837 | 0.76 | 0.634901 |
Target: 5'- gCCUCGgccgcACAGUGGGccggcgggGGCUGUgUGCCc -3' miRNA: 3'- -GGAGCa----UGUCGCCCa-------CCGAUAgAUGG- -5' |
|||||||
29080 | 5' | -53 | NC_006146.1 | + | 108545 | 1.13 | 0.003924 |
Target: 5'- uCCUCGUACAGCGGGUGGCUAUCUACCc -3' miRNA: 3'- -GGAGCAUGUCGCCCACCGAUAGAUGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home