Results 21 - 40 of 72 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 136248 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 135133 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 135319 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 135412 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 135876 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 137270 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 137363 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 137456 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 137549 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 136991 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 136898 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 136620 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 137177 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 135969 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 136062 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 136341 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 136434 | 0.66 | 0.874639 |
Target: 5'- -gGCG-GGggGUggccGGGCCgcugccggguccGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA----UCCGGa-----------CGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 136713 | 0.66 | 0.873909 |
Target: 5'- -gGCG-GGggGUggccggccgcugccGGGUCcGCUGCCCGg -3' miRNA: 3'- gaCGCaUCuuCA--------------UCCGGaCGACGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 94595 | 0.66 | 0.868744 |
Target: 5'- uCUGCGUGGGAGaggaAGaGCC-GCguccaGCCCAc -3' miRNA: 3'- -GACGCAUCUUCa---UC-CGGaCGa----CGGGU- -5' |
|||||||
29131 | 5' | -56.4 | NC_006146.1 | + | 125996 | 0.67 | 0.861183 |
Target: 5'- gCUGCGaggcuUGGGAGUGGGggcggugggcuUCUGCUGCUgGg -3' miRNA: 3'- -GACGC-----AUCUUCAUCC-----------GGACGACGGgU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home