Results 121 - 140 of 363 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 29142 | 0.67 | 0.534164 |
Target: 5'- uCGCGG-GAGCGcGCgugacCCGCCGCGa -3' miRNA: 3'- -GCGCCgCUCGCaCGagc--GGCGGUGCc -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 96065 | 0.67 | 0.534164 |
Target: 5'- aGCuGGCGAGCGaGC-CGC-GCgCGCGGc -3' miRNA: 3'- gCG-CCGCUCGCaCGaGCGgCG-GUGCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 98427 | 0.67 | 0.534164 |
Target: 5'- uGCgaGGCGGcCGUGCUCGCCGagaaCCugGc -3' miRNA: 3'- gCG--CCGCUcGCACGAGCGGC----GGugCc -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 81186 | 0.67 | 0.534164 |
Target: 5'- aCGCcGcCGAGCGUGUaCGCCggGCCGCa- -3' miRNA: 3'- -GCGcC-GCUCGCACGaGCGG--CGGUGcc -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 40140 | 0.67 | 0.534164 |
Target: 5'- cCGCGGCG-GCGacgGC-CgGCC-CCGCGGc -3' miRNA: 3'- -GCGCCGCuCGCa--CGaG-CGGcGGUGCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 112176 | 0.67 | 0.534164 |
Target: 5'- cCGCGGCGaAGCGa--UCGC-GCCGCGc -3' miRNA: 3'- -GCGCCGC-UCGCacgAGCGgCGGUGCc -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 99570 | 0.67 | 0.531352 |
Target: 5'- gCGCGGCGcugcugcgcgagguGGCGgcgGCcgagCGCCGCgC-CGGg -3' miRNA: 3'- -GCGCCGC--------------UCGCa--CGa---GCGGCG-GuGCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 72342 | 0.68 | 0.524812 |
Target: 5'- gGCcGCGAGCacg-UCGCCGCCGCaGGg -3' miRNA: 3'- gCGcCGCUCGcacgAGCGGCGGUG-CC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 131446 | 0.68 | 0.524812 |
Target: 5'- gGCGGCGGGCGgaaGUccgggCGCCGCaccucgccCACGa -3' miRNA: 3'- gCGCCGCUCGCa--CGa----GCGGCG--------GUGCc -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 130628 | 0.68 | 0.524812 |
Target: 5'- uCGCGGCucacGAGCGccGCcgagGCCGCCuGCGGc -3' miRNA: 3'- -GCGCCG----CUCGCa-CGag--CGGCGG-UGCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 50090 | 0.68 | 0.524812 |
Target: 5'- aCGCGGCGcGCGUacgcgaucaGCUC-CgGuCCGCGGu -3' miRNA: 3'- -GCGCCGCuCGCA---------CGAGcGgC-GGUGCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 70915 | 0.68 | 0.515522 |
Target: 5'- uGCcuGGCGcGCGUGCUggCGCUGCacgACGGc -3' miRNA: 3'- gCG--CCGCuCGCACGA--GCGGCGg--UGCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 111366 | 0.68 | 0.515522 |
Target: 5'- gCGgGGCGAGgGccccucGCcgucgUCGCCGCCGcCGGc -3' miRNA: 3'- -GCgCCGCUCgCa-----CG-----AGCGGCGGU-GCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 117246 | 0.68 | 0.515522 |
Target: 5'- aCGuCGGCGGGCccgagGCgcggGCCGCgCGCGGc -3' miRNA: 3'- -GC-GCCGCUCGca---CGag--CGGCG-GUGCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 2332 | 0.68 | 0.515522 |
Target: 5'- gGCGGCcucGGCGUcggGCUCcaGCagCGCCGCGGc -3' miRNA: 3'- gCGCCGc--UCGCA---CGAG--CG--GCGGUGCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 124849 | 0.68 | 0.515522 |
Target: 5'- aCGCGGCGcGUGUGCa-GCCugGCCAagUGGc -3' miRNA: 3'- -GCGCCGCuCGCACGagCGG--CGGU--GCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 130556 | 0.68 | 0.515522 |
Target: 5'- gGCGGCGcGC-UGC-CGCC-CCACGa -3' miRNA: 3'- gCGCCGCuCGcACGaGCGGcGGUGCc -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 24499 | 0.68 | 0.515522 |
Target: 5'- -cCGGCGAGCccguaaaaguUGggCGCCGCCACGu -3' miRNA: 3'- gcGCCGCUCGc---------ACgaGCGGCGGUGCc -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 81369 | 0.68 | 0.515522 |
Target: 5'- -cCGGCGGGCGccaGCgcgaGCCgcGCCGCGGc -3' miRNA: 3'- gcGCCGCUCGCa--CGag--CGG--CGGUGCC- -5' |
|||||||
29371 | 3' | -62.9 | NC_006151.1 | + | 135954 | 0.68 | 0.515522 |
Target: 5'- uCGCGGCGcgGGaCGUcCUCGagGCCAUGGa -3' miRNA: 3'- -GCGCCGC--UC-GCAcGAGCggCGGUGCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home