Results 121 - 140 of 220 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 119797 | 0.68 | 0.954252 |
Target: 5'- --gUGACGGACcacgccggcuuccgGCACGCGCuGCGcgCUCu -3' miRNA: 3'- caaACUGUCUG--------------UGUGUGCG-CGCa-GGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 57233 | 0.68 | 0.955052 |
Target: 5'- ----cGCAGGCgGCGCGCGCggccucgGCGUCCg -3' miRNA: 3'- caaacUGUCUG-UGUGUGCG-------CGCAGGg -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 68606 | 0.68 | 0.955052 |
Target: 5'- ---cGACGcgccucggaagcGACACGCGaacugccCGCGCGUCgCCg -3' miRNA: 3'- caaaCUGU------------CUGUGUGU-------GCGCGCAG-GG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 98713 | 0.68 | 0.955448 |
Target: 5'- ---aGACGG-CGCGCGCGCuCGUgcagcCCCg -3' miRNA: 3'- caaaCUGUCuGUGUGUGCGcGCA-----GGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 59886 | 0.68 | 0.955448 |
Target: 5'- --cUGGCgaAGGCGucCAgGCGCGCGUCgCg -3' miRNA: 3'- caaACUG--UCUGU--GUgUGCGCGCAGgG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 106548 | 0.68 | 0.947066 |
Target: 5'- ----uGCuGGCGCGCAUGUGCaUCCCc -3' miRNA: 3'- caaacUGuCUGUGUGUGCGCGcAGGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 88372 | 0.68 | 0.947066 |
Target: 5'- ----cGCAGGCucgGCGCGaGCGCGUCCg -3' miRNA: 3'- caaacUGUCUG---UGUGUgCGCGCAGGg -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 52153 | 0.68 | 0.937706 |
Target: 5'- ------gAGACGCugucCACGUGCGUCUCg -3' miRNA: 3'- caaacugUCUGUGu---GUGCGCGCAGGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 83003 | 0.68 | 0.947066 |
Target: 5'- ---cGGCcgcGGCGCAgACGCGCGgcgagggCCCc -3' miRNA: 3'- caaaCUGu--CUGUGUgUGCGCGCa------GGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 76958 | 0.68 | 0.937706 |
Target: 5'- ----cGCAGACGgcCGCGCGCGCGUagaaggCCa -3' miRNA: 3'- caaacUGUCUGU--GUGUGCGCGCAg-----GG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 60403 | 0.68 | 0.94251 |
Target: 5'- ---aGACgaGGGCGCGCACGgcccaGCGgCCCa -3' miRNA: 3'- caaaCUG--UCUGUGUGUGCg----CGCaGGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 138331 | 0.68 | 0.94251 |
Target: 5'- ----uGCGGGCccgGCACGCGCGCaG-CCCg -3' miRNA: 3'- caaacUGUCUG---UGUGUGCGCG-CaGGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 49930 | 0.68 | 0.94251 |
Target: 5'- --cUGACGGACACGauccgccgggacCugGCcGCGgCCCu -3' miRNA: 3'- caaACUGUCUGUGU------------GugCG-CGCaGGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 68767 | 0.68 | 0.94251 |
Target: 5'- ---cGGCGGugGCGCGCGCgGCGaggugCgCCg -3' miRNA: 3'- caaaCUGUCugUGUGUGCG-CGCa----G-GG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 121993 | 0.68 | 0.94251 |
Target: 5'- ---gGGCGGcGCGugccgcuucCACGCGCGCGUCgCg -3' miRNA: 3'- caaaCUGUC-UGU---------GUGUGCGCGCAGgG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 133156 | 0.68 | 0.946622 |
Target: 5'- ---cGGCGGcgGCGCGgGCGUgggccucggccacGCGUCCCa -3' miRNA: 3'- caaaCUGUC--UGUGUgUGCG-------------CGCAGGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 51122 | 0.68 | 0.947066 |
Target: 5'- ----uGCGGGCcuCGCGCaGgGCGUCCCg -3' miRNA: 3'- caaacUGUCUGu-GUGUG-CgCGCAGGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 126515 | 0.68 | 0.947066 |
Target: 5'- uGUUUGGCA---ACACGuCuCGCGUCCCu -3' miRNA: 3'- -CAAACUGUcugUGUGU-GcGCGCAGGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 59245 | 0.68 | 0.947066 |
Target: 5'- ---cGGCcGACGCGCACGC-CGaaggccuccUCCCa -3' miRNA: 3'- caaaCUGuCUGUGUGUGCGcGC---------AGGG- -5' |
|||||||
29395 | 5' | -52.3 | NC_006151.1 | + | 81579 | 0.68 | 0.947066 |
Target: 5'- ----aGCAGGguCuCGCGCGCGUCgCCg -3' miRNA: 3'- caaacUGUCUguGuGUGCGCGCAG-GG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home