Results 101 - 120 of 389 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 39454 | 0.67 | 0.503217 |
Target: 5'- gGCCGcccaGUGCGCCgugCGCugGCCCGgGu -3' miRNA: 3'- aCGGCucg-UACGCGGa--GCG--CGGGCgC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 50448 | 0.67 | 0.503217 |
Target: 5'- gGCCuGGGCAccgcccgcggGCG-CUCGCGCCagCGCGg -3' miRNA: 3'- aCGG-CUCGUa---------CGCgGAGCGCGG--GCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 75856 | 0.67 | 0.503217 |
Target: 5'- cGUCGA-CGggGCGCCccugCGUGUCCGCGu -3' miRNA: 3'- aCGGCUcGUa-CGCGGa---GCGCGGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 104550 | 0.67 | 0.503217 |
Target: 5'- gGCCGAGCuggcCGCCcUGgGCgCGCGg -3' miRNA: 3'- aCGGCUCGuac-GCGGaGCgCGgGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 63753 | 0.67 | 0.503217 |
Target: 5'- cGUCG-GCGggGCGuCCUCgGCGCCCccGCGu -3' miRNA: 3'- aCGGCuCGUa-CGC-GGAG-CGCGGG--CGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 81669 | 0.67 | 0.503217 |
Target: 5'- cGCacgGAGCGgcgguaCGCCUCGgcgacgguCGCCCGCGc -3' miRNA: 3'- aCGg--CUCGUac----GCGGAGC--------GCGGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 123228 | 0.67 | 0.503217 |
Target: 5'- cGCCGGGUuccGCGCacggCGCGCguuCUGCGa -3' miRNA: 3'- aCGGCUCGua-CGCGga--GCGCG---GGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 3406 | 0.67 | 0.503217 |
Target: 5'- gGCCGcGGCGUGUggGUCUCGCcgGCCgggaCGCGg -3' miRNA: 3'- aCGGC-UCGUACG--CGGAGCG--CGG----GCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 40044 | 0.67 | 0.501365 |
Target: 5'- cGCCGGGg--GCGCCguggagacccacCG-GCCCGCGg -3' miRNA: 3'- aCGGCUCguaCGCGGa-----------GCgCGGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 57975 | 0.67 | 0.494906 |
Target: 5'- aGCCGgugGGCGgcgagcGCGCCgcggaccgccuccggCGCGgCCGCGg -3' miRNA: 3'- aCGGC---UCGUa-----CGCGGa--------------GCGCgGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 130911 | 0.67 | 0.484834 |
Target: 5'- cGCCGucGUcgGUGgC-CGgGCCCGCGg -3' miRNA: 3'- aCGGCu-CGuaCGCgGaGCgCGGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 127402 | 0.67 | 0.491233 |
Target: 5'- gGCCGAgucgacgggagcccGCGggGuCGCCUCgGCGCUCGUGc -3' miRNA: 3'- aCGGCU--------------CGUa-C-GCGGAG-CGCGGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 139134 | 0.67 | 0.493068 |
Target: 5'- cGCCc--CGUGCGcCCUCGUcuucccgcuguacGCCCGCGc -3' miRNA: 3'- aCGGcucGUACGC-GGAGCG-------------CGGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 37937 | 0.67 | 0.493987 |
Target: 5'- cGCCGcGCA-GCccgGCCgCGUGCcCCGCGa -3' miRNA: 3'- aCGGCuCGUaCG---CGGaGCGCG-GGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 49249 | 0.67 | 0.493987 |
Target: 5'- gGCUGGGC--GCGgCUCGUGCgCGCc -3' miRNA: 3'- aCGGCUCGuaCGCgGAGCGCGgGCGc -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 52034 | 0.67 | 0.493987 |
Target: 5'- cGgCGAagGCcgGCGCCgUCGCGUgCGUGu -3' miRNA: 3'- aCgGCU--CGuaCGCGG-AGCGCGgGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 68895 | 0.67 | 0.493987 |
Target: 5'- cGUCGAGgAcG-GCCUCGCGgUCGCGc -3' miRNA: 3'- aCGGCUCgUaCgCGGAGCGCgGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 87282 | 0.67 | 0.493987 |
Target: 5'- aGCCGGggcuGCAcGCGCCgcccccCuCGCCCGUGg -3' miRNA: 3'- aCGGCU----CGUaCGCGGa-----GcGCGGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 90228 | 0.67 | 0.493987 |
Target: 5'- gGCCGAgaucGCGUcGCGgCUgGCcagcgcccaGCCCGCGg -3' miRNA: 3'- aCGGCU----CGUA-CGCgGAgCG---------CGGGCGC- -5' |
|||||||
29649 | 5' | -63.6 | NC_006151.1 | + | 92198 | 0.67 | 0.493987 |
Target: 5'- cGCCGAc---GCGCCgcCGCGgCCGCGc -3' miRNA: 3'- aCGGCUcguaCGCGGa-GCGCgGGCGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home