Results 41 - 60 of 334 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
29981 | 3' | -58 | NC_006273.1 | + | 1558 | 0.72 | 0.597795 |
Target: 5'- --cACGCUG-AUCCUAGCGGC-GCGCg -3' miRNA: 3'- uuaUGCGGCaUGGGGUUGCCGgCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 197182 | 0.72 | 0.597795 |
Target: 5'- ---cCGCCGU-CUCCGgaugaGCGGCCGCGg -3' miRNA: 3'- uuauGCGGCAuGGGGU-----UGCCGGCGCg -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 196451 | 0.72 | 0.597795 |
Target: 5'- --cACGCUG-AUCCUAGCGGC-GCGCg -3' miRNA: 3'- uuaUGCGGCaUGGGGUUGCCGgCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 153345 | 0.72 | 0.606615 |
Target: 5'- ---cCGCCGcUGCCgcuucguccgaggCCGGCGGCaCGCGCg -3' miRNA: 3'- uuauGCGGC-AUGG-------------GGUUGCCG-GCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 38791 | 0.72 | 0.617413 |
Target: 5'- --aGCGCCGUcGCCUCcuCGGC-GCGCa -3' miRNA: 3'- uuaUGCGGCA-UGGGGuuGCCGgCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 233683 | 0.72 | 0.617413 |
Target: 5'- --aGCGCCGUcGCCUCcuCGGC-GCGCa -3' miRNA: 3'- uuaUGCGGCA-UGGGGuuGCCGgCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 68223 | 0.72 | 0.627241 |
Target: 5'- ---cCGCCGUgGCCaCCAACGGCgGCa- -3' miRNA: 3'- uuauGCGGCA-UGG-GGUUGCCGgCGcg -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 108871 | 0.72 | 0.627241 |
Target: 5'- --cGCGCacgaGUACCaCAACuGGCUGCGCu -3' miRNA: 3'- uuaUGCGg---CAUGGgGUUG-CCGGCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 75260 | 0.72 | 0.627241 |
Target: 5'- --aGCGCUGgccGCCgCGGCGGCCGCc- -3' miRNA: 3'- uuaUGCGGCa--UGGgGUUGCCGGCGcg -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 168617 | 0.71 | 0.637073 |
Target: 5'- --aGCGCCGaGCCgCGGCugcccgGGUCGCGCa -3' miRNA: 3'- uuaUGCGGCaUGGgGUUG------CCGGCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 39136 | 0.71 | 0.637073 |
Target: 5'- -uUACGCCGUGCCUuucaCGACGccgggaaaGCCGgGCu -3' miRNA: 3'- uuAUGCGGCAUGGG----GUUGC--------CGGCgCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 45246 | 0.71 | 0.637073 |
Target: 5'- -uUGC-CCGUGCcgCCCGGCGGCUGCucGCg -3' miRNA: 3'- uuAUGcGGCAUG--GGGUUGCCGGCG--CG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 28808 | 0.71 | 0.637073 |
Target: 5'- -cUACGCCGggGCCCUA--GGCCGCa- -3' miRNA: 3'- uuAUGCGGCa-UGGGGUugCCGGCGcg -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 82500 | 0.71 | 0.6469 |
Target: 5'- --cGCGCCacccacgGCCCCAAUGGCUaCGCc -3' miRNA: 3'- uuaUGCGGca-----UGGGGUUGCCGGcGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 36551 | 0.71 | 0.6469 |
Target: 5'- --gAgGCCGagaGCCCCAgaucGCGcGCCGUGCg -3' miRNA: 3'- uuaUgCGGCa--UGGGGU----UGC-CGGCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 68335 | 0.71 | 0.6469 |
Target: 5'- cAUGCgGCUGcacgACUCC-ACGGCCGUGCa -3' miRNA: 3'- uUAUG-CGGCa---UGGGGuUGCCGGCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 70327 | 0.71 | 0.6469 |
Target: 5'- --cGCGCCGUGCgucugCCCGugagcaccGCuGCCGCGCc -3' miRNA: 3'- uuaUGCGGCAUG-----GGGU--------UGcCGGCGCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 175087 | 0.71 | 0.6469 |
Target: 5'- gAGU-CGCCGUcUCCCGACGGCaCGcCGUc -3' miRNA: 3'- -UUAuGCGGCAuGGGGUUGCCG-GC-GCG- -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 213458 | 0.71 | 0.6469 |
Target: 5'- --aGCGCCGUcuACCcgaugCCGGCGGCUGCa- -3' miRNA: 3'- uuaUGCGGCA--UGG-----GGUUGCCGGCGcg -5' |
|||||||
29981 | 3' | -58 | NC_006273.1 | + | 92581 | 0.71 | 0.656718 |
Target: 5'- --cACGcCCGUGCCCaccagCGACGGCgGCuGCu -3' miRNA: 3'- uuaUGC-GGCAUGGG-----GUUGCCGgCG-CG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home