Results 61 - 65 of 65 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
30041 | 3' | -52.2 | NC_006273.1 | + | 64764 | 0.67 | 0.979578 |
Target: 5'- aAAGAAGCUGCccGCcGGcgGGCGgcUGCCg -3' miRNA: 3'- -UUCUUCGACGa-CGaCU--UCGUgaACGG- -5' |
|||||||
30041 | 3' | -52.2 | NC_006273.1 | + | 56267 | 0.67 | 0.979578 |
Target: 5'- aGGGAcgguGGCUGguCUGCUGggGCGgguacgGCCg -3' miRNA: 3'- -UUCU----UCGAC--GACGACuuCGUgaa---CGG- -5' |
|||||||
30041 | 3' | -52.2 | NC_006273.1 | + | 194855 | 0.67 | 0.979578 |
Target: 5'- cAGAAGCg---GC-GGAGCGCUUGCg -3' miRNA: 3'- uUCUUCGacgaCGaCUUCGUGAACGg -5' |
|||||||
30041 | 3' | -52.2 | NC_006273.1 | + | 66812 | 0.67 | 0.979578 |
Target: 5'- cAGGAGCaGCUaGCUcagcugGAAGCGCUaggcgGCCu -3' miRNA: 3'- uUCUUCGaCGA-CGA------CUUCGUGAa----CGG- -5' |
|||||||
30041 | 3' | -52.2 | NC_006273.1 | + | 45224 | 1.09 | 0.006993 |
Target: 5'- gAAGAAGCUGCUGCUGAAGCACUUGCCc -3' miRNA: 3'- -UUCUUCGACGACGACUUCGUGAACGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home