Results 21 - 40 of 156 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 729 | 0.66 | 0.99301 |
Target: 5'- aGGCGgcgcCAGCAAGCGCcauacACGUcGCUg -3' miRNA: 3'- -UCGCacuuGUCGUUCGCGu----UGUA-CGA- -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 203728 | 0.66 | 0.993941 |
Target: 5'- uGGUGcUGGagAUAGC-AGCGCAGCAcGCg -3' miRNA: 3'- -UCGC-ACU--UGUCGuUCGCGUUGUaCGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 144419 | 0.66 | 0.993941 |
Target: 5'- uGCGUGGAggaGGCGaccacGGUGCGAC-UGCa -3' miRNA: 3'- uCGCACUUg--UCGU-----UCGCGUUGuACGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 171551 | 0.66 | 0.995503 |
Target: 5'- uGCGUGGGagaGGuCAcuCGCGGCGUGCc -3' miRNA: 3'- uCGCACUUg--UC-GUucGCGUUGUACGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 194437 | 0.66 | 0.993941 |
Target: 5'- cGGUGcUGGGCaAGCGAGuCGCGACGccGCa -3' miRNA: 3'- -UCGC-ACUUG-UCGUUC-GCGUUGUa-CGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 2339 | 0.66 | 0.994769 |
Target: 5'- uGGCGgcgGAGCugucGCAcuuucuGCGCGcggGCGUGCUg -3' miRNA: 3'- -UCGCa--CUUGu---CGUu-----CGCGU---UGUACGA- -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 157662 | 0.66 | 0.994769 |
Target: 5'- cGGCGUGAcACAGCAcGCugauaCGACGUGg- -3' miRNA: 3'- -UCGCACU-UGUCGUuCGc----GUUGUACga -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 162282 | 0.66 | 0.99301 |
Target: 5'- cGGCGguccuccAGCAGCAgcuGGUGCAucACGUGCc -3' miRNA: 3'- -UCGCac-----UUGUCGU---UCGCGU--UGUACGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 99950 | 0.66 | 0.990809 |
Target: 5'- gAGCGUGGAgA-CGAGCGC-GCAgccGCUg -3' miRNA: 3'- -UCGCACUUgUcGUUCGCGuUGUa--CGA- -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 150627 | 0.66 | 0.993941 |
Target: 5'- gGGCGUuucccGGAgGGUccGCGCAACAcGCa -3' miRNA: 3'- -UCGCA-----CUUgUCGuuCGCGUUGUaCGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 74691 | 0.66 | 0.995434 |
Target: 5'- cGCGUccagagaGGGCAGCAAcagaucguagacGCGCGGCA-GCa -3' miRNA: 3'- uCGCA-------CUUGUCGUU------------CGCGUUGUaCGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 193246 | 0.66 | 0.994769 |
Target: 5'- cGgGUGGACgacgAGguGGUGCAGCGUGa- -3' miRNA: 3'- uCgCACUUG----UCguUCGCGUUGUACga -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 142006 | 0.66 | 0.993941 |
Target: 5'- gGGUGUGGcuAC-GCGAGUGUGACGUGg- -3' miRNA: 3'- -UCGCACU--UGuCGUUCGCGUUGUACga -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 15309 | 0.66 | 0.995503 |
Target: 5'- cGGCGUuuuGAGC-GCGAGCGuCAACGUcagacGCg -3' miRNA: 3'- -UCGCA---CUUGuCGUUCGC-GUUGUA-----CGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 30479 | 0.66 | 0.994769 |
Target: 5'- cAGCGUuuucacGAGCAcGCGGGCGC-GCA-GCg -3' miRNA: 3'- -UCGCA------CUUGU-CGUUCGCGuUGUaCGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 164244 | 0.66 | 0.991969 |
Target: 5'- uGCGUGAgcaccgugauagGCGGCGAG-GCGAaacugGUGCUg -3' miRNA: 3'- uCGCACU------------UGUCGUUCgCGUUg----UACGA- -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 215747 | 0.66 | 0.99301 |
Target: 5'- aAGCGaccGCAGUggGCccaCAGCAUGCUc -3' miRNA: 3'- -UCGCacuUGUCGuuCGc--GUUGUACGA- -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 164682 | 0.66 | 0.993941 |
Target: 5'- -aCGUGGAgGGCGGuCGCAGCAcGCg -3' miRNA: 3'- ucGCACUUgUCGUUcGCGUUGUaCGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 176293 | 0.66 | 0.995434 |
Target: 5'- cGCGUGAGCAGCGcuacucgcuguuuGG-GCGGCcUGUc -3' miRNA: 3'- uCGCACUUGUCGU-------------UCgCGUUGuACGa -5' |
|||||||
30186 | 3' | -51.8 | NC_006273.1 | + | 149632 | 0.66 | 0.9924 |
Target: 5'- cGGCGacGGCAGCGAaaacggcuuacggguGCGCAAC-UGCg -3' miRNA: 3'- -UCGCacUUGUCGUU---------------CGCGUUGuACGa -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home