miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
30234	5'	-55	NC_006273.1	+	52579	0.7	0.852369
	Target:  5'- uGUucCCaGCAGGGACCG--UGUGCGGu -3' miRNA:   3'- gCGu-GGaCGUCCUUGGUcaACACGCC- -5'
30234	5'	-55	NC_006273.1	+	154671	0.7	0.852369
	Target:  5'- gGCACCUGCGGGcaggugGGCCAGac--GUGGa -3' miRNA:   3'- gCGUGGACGUCC------UUGGUCaacaCGCC- -5'
30234	5'	-55	NC_006273.1	+	41005	0.7	0.85995
	Target:  5'- gGggUgUGCGGGGACgGGgggUGUGCGGg -3' miRNA:   3'- gCguGgACGUCCUUGgUCa--ACACGCC- -5'
30234	5'	-55	NC_006273.1	+	186551	0.7	0.85995
	Target:  5'- aCGCACCUguggccGCAGGAGCuuCAGgcccUGUGUGa -3' miRNA:   3'- -GCGUGGA------CGUCCUUG--GUCa---ACACGCc -5'
30234	5'	-55	NC_006273.1	+	198456	0.68	0.91878
	Target:  5'- aCGcCACCUGCcGGuACCAGgUGUucGUGGa -3' miRNA:   3'- -GC-GUGGACGuCCuUGGUCaACA--CGCC- -5'
30234	5'	-55	NC_006273.1	+	198996	0.68	0.924209
	Target:  5'- gGCGCUggugggGCAGGAua-AGUUgGUGCGGc -3' miRNA:   3'- gCGUGGa-----CGUCCUuggUCAA-CACGCC- -5'
30234	5'	-55	NC_006273.1	+	40957	0.78	0.427877
	Target:  5'- uGCGCCggggacggggggugUGCGGGGACgGGgggUGUGCGGg -3' miRNA:   3'- gCGUGG--------------ACGUCCUUGgUCa--ACACGCC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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