Results 41 - 45 of 45 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 31021 | 5' | -56.4 | NC_006560.1 | + | 140520 | 0.67 | 0.84113 |
|
Target: 5'- cUGCGGGGCcgcuucaUCGCcGgGCGCGgagAGggGg -3' miRNA: 3'- -ACGCCUCG-------AGCGaCgCGUGCa--UCaaC- -5' |
|||||||
| 31021 | 5' | -56.4 | NC_006560.1 | + | 39613 | 0.67 | 0.841947 |
|
Target: 5'- cGCGGAGCgcCGCgGCGgGCGUcGg-- -3' miRNA: 3'- aCGCCUCGa-GCGaCGCgUGCAuCaac -5' |
|||||||
| 31021 | 5' | -56.4 | NC_006560.1 | + | 130811 | 0.67 | 0.846811 |
|
Target: 5'- cGCGGGGCcaCGCgcaggccgugacgGCGCGCGUccuGGUg- -3' miRNA: 3'- aCGCCUCGa-GCGa------------CGCGUGCA---UCAac -5' |
|||||||
| 31021 | 5' | -56.4 | NC_006560.1 | + | 101810 | 0.66 | 0.857882 |
|
Target: 5'- gGCGGAGCagCGCcGCGacCACGgcGUg- -3' miRNA: 3'- aCGCCUCGa-GCGaCGC--GUGCauCAac -5' |
|||||||
| 31021 | 5' | -56.4 | NC_006560.1 | + | 136157 | 0.65 | 0.891992 |
|
Target: 5'- gGCGGGGCUCcugggucgccaccuGCUGacgGC-CGUGGUg- -3' miRNA: 3'- aCGCCUCGAG--------------CGACg--CGuGCAUCAac -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home