Results 21 - 22 of 22 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
31065 | 5' | -58.3 | NC_006560.1 | + | 43125 | 0.72 | 0.504086 |
Target: 5'- -gUCCGUCGCGgCCGcggGGUCgGgGUCg -3' miRNA: 3'- agAGGUAGCGCaGGCa--CCAGgCgCAG- -5' |
|||||||
31065 | 5' | -58.3 | NC_006560.1 | + | 71296 | 1.1 | 0.001683 |
Target: 5'- cUCUCCAUCGCGUCCGUGGUCCGCGUCg -3' miRNA: 3'- -AGAGGUAGCGCAGGCACCAGGCGCAG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home