miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
31326	5'	-51.7	NC_006623.1	+	28186	0.66	0.976774
	Target:  5'- aACaAGGGCCCUgaGCAcuaGGAGUAGGc- -3' miRNA:   3'- gUGaUCUCGGGAa-CGU---UCUCGUCUuu -5'
31326	5'	-51.7	NC_006623.1	+	1541	0.67	0.944055
	Target:  5'- gCugUGGAGCUaaaagGCAGuuGAGCGGAAAg -3' miRNA:   3'- -GugAUCUCGGgaa--CGUU--CUCGUCUUU- -5'
31326	5'	-51.7	NC_006623.1	+	90014	0.68	0.933982
	Target:  5'- uGC-GGAGCUagaCUUGCAGcGGGCAGAAGa -3' miRNA:   3'- gUGaUCUCGG---GAACGUU-CUCGUCUUU- -5'
31326	5'	-51.7	NC_006623.1	+	109027	0.68	0.933982
	Target:  5'- aACUAuGG-CCUUGCGaguAGAGCAGAAGu -3' miRNA:   3'- gUGAUcUCgGGAACGU---UCUCGUCUUU- -5'
31326	5'	-51.7	NC_006623.1	+	144908	0.69	0.910603
	Target:  5'- cUACgGGAGUCCUggcgGCGgcgacGGAGCAGAGc -3' miRNA:   3'- -GUGaUCUCGGGAa---CGU-----UCUCGUCUUu -5'
31326	5'	-51.7	NC_006623.1	+	116704	0.69	0.910603
	Target:  5'- cUACgGGAGUCCUggcgGCGgcgacGGAGCAGAGc -3' miRNA:   3'- -GUGaUCUCGGGAa---CGU-----UCUCGUCUUu -5'
31326	5'	-51.7	NC_006623.1	+	20691	0.7	0.859596
	Target:  5'- cCACUGGAGCCUUUGCAcu-GUAuGAAGu -3' miRNA:   3'- -GUGAUCUCGGGAACGUucuCGU-CUUU- -5'
31326	5'	-51.7	NC_006623.1	+	113050	1.07	0.0069
	Target:  5'- aCACUAGAGCCCUUGCAAGAGCAGAAAa -3' miRNA:   3'- -GUGAUCUCGGGAACGUUCUCGUCUUU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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