miRNA display CGI

Results 41 - 48 of 48 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
31661	3'	-57.8	NC_006883.1	+	28499	0.78	0.313403
	Target:  5'- gACCAguuCCACCuGGaCCAGGAGGACCa -3' miRNA:   3'- gUGGU---GGUGGuCUaGGUCCUCCUGGa -5'
31661	3'	-57.8	NC_006883.1	+	26580	0.78	0.313403
	Target:  5'- gCACCGucugcuCCAUCAuuUCCAGGAGGACCUg -3' miRNA:   3'- -GUGGU------GGUGGUcuAGGUCCUCCUGGA- -5'
31661	3'	-57.8	NC_006883.1	+	27679	0.83	0.167106
	Target:  5'- uCAgCACCAUCAuuUCCAGGAGGACCUg -3' miRNA:   3'- -GUgGUGGUGGUcuAGGUCCUCCUGGA- -5'
31661	3'	-57.8	NC_006883.1	+	27607	0.83	0.167106
	Target:  5'- uCAgCACCAUCAuuUCCAGGAGGACCUg -3' miRNA:   3'- -GUgGUGGUGGUcuAGGUCCUCCUGGA- -5'
31661	3'	-57.8	NC_006883.1	+	22184	0.84	0.151534
	Target:  5'- gACCACCACUAGGaCCuGGAGGACCa -3' miRNA:   3'- gUGGUGGUGGUCUaGGuCCUCCUGGa -5'
31661	3'	-57.8	NC_006883.1	+	23225	0.87	0.099106
	Target:  5'- gACCACCAgCAGGaCCAGGAGGACCa -3' miRNA:   3'- gUGGUGGUgGUCUaGGUCCUCCUGGa -5'
31661	3'	-57.8	NC_006883.1	+	223084	0.9	0.056352
	Target:  5'- cCACCACCAgCAGGaCCAGGAGGACCUg -3' miRNA:   3'- -GUGGUGGUgGUCUaGGUCCUCCUGGA- -5'
31661	3'	-57.8	NC_006883.1	+	23748	1.07	0.004116
	Target:  5'- gCACCACCACCAGAUCCAGGAGGACCUg -3' miRNA:   3'- -GUGGUGGUGGUCUAGGUCCUCCUGGA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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