Results 1 - 20 of 30 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 115828 | 0.67 | 0.856255 |
Target: 5'- -gGGCGGCaaaaaccgCCC-CGUGGGcACCa -3' miRNA: 3'- ugCCGCCGcaua----GGGaGCACCUaUGG- -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113811 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113849 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113887 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113925 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113963 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 114001 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 114039 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 114077 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113773 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113717 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113679 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 78371 | 0.71 | 0.640923 |
Target: 5'- aGCGGCGGaguGUGUUCCUCG-GGuaacgcaACCg -3' miRNA: 3'- -UGCCGCCg--CAUAGGGAGCaCCua-----UGG- -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 85731 | 0.69 | 0.750941 |
Target: 5'- uCGGUGGCGUGaguUCCCUCaa--GUACCu -3' miRNA: 3'- uGCCGCCGCAU---AGGGAGcaccUAUGG- -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 26313 | 0.68 | 0.788462 |
Target: 5'- uACGGCugugaGGCGUggagauggguGUCCgUUCcUGGAUACCa -3' miRNA: 3'- -UGCCG-----CCGCA----------UAGG-GAGcACCUAUGG- -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 29747 | 0.68 | 0.788462 |
Target: 5'- uCGGCGGUu--UCCCUgGUcGGggACCg -3' miRNA: 3'- uGCCGCCGcauAGGGAgCA-CCuaUGG- -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113527 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113565 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113603 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
|||||||
32086 | 3' | -56.2 | NC_007016.1 | + | 113641 | 0.67 | 0.823743 |
Target: 5'- cCGGUGGgGUgcagGUCCCcCGgugGGGUGCa -3' miRNA: 3'- uGCCGCCgCA----UAGGGaGCa--CCUAUGg -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home