miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
3237	5'	-53.4	NC_001514.1	+	6099	0.66	0.260787
	Target:  5'- aAGGGCcCUGAcccuguccUCAUauggGGGCGAGGCucagccUGCa -3' miRNA:   3'- -UCCUG-GACU--------AGUG----CCCGUUCUGu-----ACG- -5'
3237	5'	-53.4	NC_001514.1	+	2457	0.68	0.204879
	Target:  5'- cGGGCCUGGgcuccaggaguugcgCGgGGGCAAGAUuuuggaggGCa -3' miRNA:   3'- uCCUGGACUa--------------GUgCCCGUUCUGua------CG- -5'
3237	5'	-53.4	NC_001514.1	+	186	0.8	0.023283
	Target:  5'- aAGGACCUGAUCACGcaCAGaACAUGCa -3' miRNA:   3'- -UCCUGGACUAGUGCccGUUcUGUACG- -5'
3237	5'	-53.4	NC_001514.1	+	8507	0.8	0.023283
	Target:  5'- aAGGACCUGAUCACGcaCAGaACAUGCa -3' miRNA:   3'- -UCCUGGACUAGUGCccGUUcUGUACG- -5'
3237	5'	-53.4	NC_001514.1	+	100	1.11	6.9e-05
	Target:  5'- gAGGACCUGAUCACGGGCAAGACAUGCc -3' miRNA:   3'- -UCCUGGACUAGUGCCCGUUCUGUACG- -5'
3237	5'	-53.4	NC_001514.1	+	143	1.11	6.9e-05
	Target:  5'- gAGGACCUGAUCACGGGCAAGACAUGCc -3' miRNA:   3'- -UCCUGGACUAGUGCCCGUUCUGUACG- -5'
3237	5'	-53.4	NC_001514.1	+	8421	1.11	6.9e-05
	Target:  5'- gAGGACCUGAUCACGGGCAAGACAUGCc -3' miRNA:   3'- -UCCUGGACUAGUGCCCGUUCUGUACG- -5'
3237	5'	-53.4	NC_001514.1	+	8464	1.11	6.9e-05
	Target:  5'- gAGGACCUGAUCACGGGCAAGACAUGCc -3' miRNA:   3'- -UCCUGGACUAGUGCCCGUUCUGUACG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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